euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip92 chr1 17229479 17229479 - L1-Ta germline . no 192 .
srip595 chr1 44736471 44736471 - L1-Ta germline . no 192 ERI3
srip845 chr1 56405398 56405398 - L1-Ta germline . no 192 LOC100507652
srip2001 chr1 81855783 81855783 + L1-Ta germline . no 192 .
srip2460 chr1 95801843 95801843 - L1-Ta germline . no 192 .
srip3622 chr1 114046370 114046370 + L1-Ta germline . no 192 MAGI3
srip3713 chr1 116980828 116980828 - L1-Ta germline . no 192 .
srip4037 chr1 149216797 149216797 + L1-Ta germline . no 192 .
srip5411 chr1 179575362 179575362 - L1-Ta germline . no 192 TDRD5
srip6273 chr1 194934648 194934648 - L1-Ta germline validated no 192 .
srip6365 chr1 207579511 207579511 + L1-Ta germline . no 192 .
srip7456 chr1 248454039 248454039 - L1-pre-Ta germline . no 192 .
srip7690 chr10 9525646 9525646 + L1-Ta germline . no 192 .
srip8420 chr10 25707687 25707687 - L1-Ta germline . no 192 GPR158
srip8647 chr10 27775762 27775762 + L1-Ta germline . no 192 .
srip9589 chr10 68949325 68949325 + L1-Ta germline . no 192 CTNNA3
srip9684 chr10 74767506 74767506 - L1-Ta germline . no 192 P4HA1
srip9990 chr10 85015980 85015980 + L1-Ta germline . no 192 .
srip10584 chr10 91717634 91717634 - L1-Ta germline . no 192 .
srip10661 chr10 94707828 94707828 - L1-Ta germline . no 192 EXOC6
srip11204 chr10 110453470 110453470 + L1-Ta germline . no 192 .
srip11855 chr10 124455231 124455231 + L1-Ta germline . no 192 .
srip12865 chr11 25123354 25123354 - L1-Ta germline . no 192 .
srip13789 chr11 33670123 33670123 + L1-Ta germline . no 192 C11orf41
srip13903 chr11 37666899 37666899 + L1-Ta germline . no 192 .
srip14758 chr11 48360753 48360753 - L1-Ta germline . no 192 .
srip17203 chr11 94684368 94684368 + L1-Ta germline . no 192 .
srip19316 chr11 134305648 134305648 - L1-Ta germline . no 192 .
srip20459 chr12 25775841 25775841 - L1-Ta germline . no 192 IFLTD1
srip20714 chr12 28226413 28226413 - L1-Ta germline . no 192 .
srip21159 chr12 34017325 34017325 - L1-Ta germline . no 192 .
srip21741 chr12 38035076 38035076 + L1-Ta germline . no 192 .
srip22255 chr12 43256986 43256986 - L1-Ta germline . no 192 .
srip24427 chr12 84955216 84955216 - L1-Ta germline . no 192 .
srip25131 chr12 95808527 95808527 - L1-Ta germline . no 192 .
srip25639 chr12 117814447 117814447 - L1-Ta germline . no 192 .
srip26002 chr12 118186926 118186926 + L1-Ta germline . no 192 KSR2
srip27011 chr13 22489805 22489805 + L1-Ta germline . no 192 .
srip27482 chr13 27488126 27488126 + L1-Ta germline . no 192 .
srip28168 chr13 48856541 48856541 + L1-Ta germline . no 192 .
srip29047 chr13 61462336 61462336 - L1-Ta germline . no 192 .
srip29619 chr13 61734485 61734485 + L1-Ta germline . no 192 .
srip31019 chr13 79259793 79259793 - L1-Ta germline . no 192 .
srip31425 chr13 85871602 85871602 - L1-Ta germline . no 192 .
srip32015 chr13 86340153 86340153 - L1-Ta germline . no 192 .
srip32304 chr13 91149409 91149409 - L1-Ta germline . no 192 .
srip33494 chr13 104296223 104296223 - L1-Ta germline . no 192 .
srip33651 chr13 104395943 104395943 - L1-Ta germline . no 192 .
srip33793 chr13 105280146 105280146 - L1-Ta germline . no 192 .
srip34285 chr14 19000969 19000969 + L1-Ta germline . no 192 .
srip35247 chr14 28301261 28301261 + L1-Ta germline . no 192 .
srip35460 chr14 31150809 31150809 - L1-Ta germline . no 192 SCFD1
srip35566 chr14 34140125 34140125 - L1-Ta germline . no 192 NPAS3
srip36030 chr14 36674760 36674760 + L1-Ta germline . no 192 .
srip37150 chr14 52667758 52667758 - L1-Ta germline . no 192 .
srip38608 chr14 86381796 86381796 - L1-Ta germline . no 192 .
srip39330 chr15 28175791 28175791 - L1-Ta germline . no 192 OCA2
srip39507 chr15 34031839 34031839 - L1-Ta germline . no 192 RYR3
srip39751 chr15 37707890 37707890 - L1-Ta germline . no 192 .
srip40213 chr15 47507329 47507329 - L1-Ta germline . no 192 SEMA6D
srip41245 chr15 56251153 56251153 + L1-Ta germline . no 192 NEDD4
srip41720 chr15 62169638 62169638 - L1-Ta germline . no 192 VPS13C
srip44774 chr16 32523893 32523893 - L1-Ta germline . no 192 .
srip45056 chr16 32525611 32525611 - L1-Ta germline . no 192 .
srip45481 chr16 33992430 33992430 + L1-Ta germline . no 192 .
srip45871 chr16 61079188 61079188 + L1-Ta germline . no 192 .
srip46551 chr17 6341644 6341644 - L1-Ta germline . no 192 .
srip47358 chr17 28398313 28398313 + L1-Ta germline . no 192 EFCAB5
srip49227 chr18 27219200 27219200 - L1-Ta germline . no 192 .
srip50143 chr18 50097742 50097742 - L1-Ta germline . no 192 DCC
srip50717 chr18 51762730 51762730 - L1-Ta germline . no 192 .
srip51822 chr18 74960068 74960068 - L1-Ta germline . no 192 .
srip52767 chr2 6798288 6798288 - L1-Ta germline . no 192 .
srip52810 chr2 7050603 7050603 + L1-Ta germline . no 192 .
srip52823 chr2 10946157 10946157 + L1-Ta germline . no 192 PDIA6
srip53434 chr2 23191000 23191000 - L1-Ta germline . no 192 .
srip53679 chr2 24796757 24796757 + L1-Ta germline . no 192 .
srip53734 chr2 33092073 33092073 - L1-Ta germline . no 192 LINC00486
srip54598 chr2 42051403 42051403 + L1-Ta germline . no 192 .
srip54920 chr2 53460052 53460052 + L1-Ta germline . no 192 .
srip57663 chr2 129372166 129372166 + L1-Ta germline . no 192 .
srip57814 chr2 132868182 132868182 - L1-Ta germline . no 192 .
srip58212 chr2 141852908 141852908 - L1-Ta germline . no 192 LRP1B
srip60134 chr2 178676245 178676245 - L1-Ta germline . no 192 PDE11A
srip60488 chr2 181000540 181000540 + L1-Ta germline . no 192 .
srip60800 chr2 191478714 191478714 - L1-Ta germline . no 192 .
srip62169 chr2 221503768 221503768 - L1-Ta germline . no 192 .
srip64008 chr20 25844027 25844027 + L1-Ta germline . no 192 .
srip64796 chr20 41952105 41952105 - L1-Ta germline . no 192 .
srip65256 chr20 59972453 59972453 + L1-Ta germline . no 192 CDH4
srip66032 chr21 19517313 19517313 - L1-Ta germline . no 192 .
srip66258 chr21 23626191 23626191 - L1-Ta germline . no 192 .
srip66866 chr21 29069171 29069171 + L1-Ta germline . no 192 .
srip67902 chr22 28455902 28455902 - L1-Ta germline . no 192 TTC28
srip68898 chr22 44324605 44324605 - L1-Ta germline . no 192 PNPLA3
srip69637 chr3 656435 656435 - L1-Ta germline . no 192 .
srip70070 chr3 17409573 17409573 - L1-Ta germline . no 192 TBC1D5
srip70801 chr3 24987874 24987874 - L1-Ta germline . no 192 .
srip71162 chr3 26524464 26524464 - L1-Ta germline . no 192 .
srip71924 chr3 38626082 38626082 + L1-Ta germline . no 192 SCN5A
srip72743 chr3 55788580 55788580 + L1-Ta germline . no 192 ERC2
srip72760 chr3 55788634 55788634 + L1-Ta germline . no 192 ERC2
srip72778 chr3 56401305 56401305 - L1-Ta germline . no 192 ERC2
srip73781 chr3 75101216 75101216 + L1-Ta germline . no 192 .
srip75609 chr3 85576568 85576568 + L1-Ta germline . no 192 CADM2
srip75903 chr3 89022346 89022346 - L1-Ta germline . no 192 .
srip76616 chr3 109751770 109751770 + L1-Ta germline . no 192 .
srip76697 chr3 111275065 111275065 + L1-Ta germline . no 192 CD96
srip76815 chr3 119046413 119046413 + L1-Ta germline . no 192 ARHGAP31
srip78147 chr3 143121759 143121759 - L1-Ta germline . no 192 SLC9A9
srip78600 chr3 151148544 151148544 - L1-Ta germline . no 192 MED12L
srip79322 chr3 162717306 162717306 + L1-Ta germline . no 192 .
srip80396 chr3 176091333 176091333 + L1-Ta germline . no 192 .
srip81518 chr3 186372141 186372141 + L1-Ta germline . no 192 .
srip81646 chr3 187835309 187835309 - L1-Ta germline . no 192 .
srip83345 chr4 20246382 20246382 + L1-Ta germline . no 192 .
srip83836 chr4 29321851 29321851 + L1-Ta germline . no 192 .
srip85452 chr4 57497067 57497067 - L1-Ta germline . no 192 .
srip85824 chr4 58917529 58917529 - L1-Ta germline . no 192 .
srip86199 chr4 66413932 66413932 + L1-Ta germline . no 192 EPHA5
srip86355 chr4 66809078 66809078 - L1-Ta germline . no 192 .
srip86620 chr4 69572737 69572737 - L1-Ta germline . no 192 LOC728811
srip87707 chr4 82921896 82921896 + L1-Ta germline . no 192 .
srip88825 chr4 103343746 103343746 + L1-Ta germline . no 192 .
srip89048 chr4 104597401 104597401 + L1-Ta germline . no 192 TACR3
srip89596 chr4 110248316 110248316 - L1-Ta germline . no 192 .
srip89669 chr4 110248332 110248332 - L1-Ta germline . no 192 .
srip89993 chr4 112628973 112628973 + L1-Ta germline . no 192 .
srip90295 chr4 115132695 115132695 + L1-Ta germline . no 192 .
srip92220 chr4 134596423 134596423 + L1-Ta germline . no 192 .
srip92773 chr4 138177325 138177325 + L1-Ta germline . no 192 .
srip92918 chr4 146927741 146927741 - L1-Ta germline . no 192 .
srip93111 chr4 147225296 147225296 + L1-Ta germline . no 192 SLC10A7
srip93861 chr4 158907272 158907272 - L1-Ta germline . no 192 .
srip95475 chr5 1645773 1645773 + L1-Ta germline . no 192 .
srip96053 chr5 8749515 8749515 + L1-Ta germline . no 192 .
srip96362 chr5 11391276 11391276 + L1-Ta germline . no 192 CTNND2
srip97957 chr5 33633348 33633348 - L1-Ta germline . no 192 ADAMTS12
srip98032 chr5 33797544 33797544 - L1-Ta germline . no 192 ADAMTS12
srip98173 chr5 38599852 38599852 + L1-Ta germline . no 192 LOC100506495
srip98605 chr5 46396964 46396964 + L1-Ta germline . no 192 .
srip99492 chr5 68263461 68263461 - L1-Ta germline . no 192 .
srip100081 chr5 84239673 84239673 - L1-Ta germline . no 192 .
srip100770 chr5 89450781 89450781 + L1-Ta germline . no 192 .
srip101065 chr5 96866407 96866407 + L1-Ta germline . no 192 .
srip102254 chr5 109480258 109480258 - L1-Ta germline . no 192 .
srip103375 chr5 125040045 125040045 + L1-Ta germline . no 192 .
srip104838 chr5 154873933 154873933 - L1-Ta germline . no 192 .
srip105576 chr5 159351199 159351199 - L1-Ta germline . no 192 ADRA1B
srip107086 chr6 13191033 13191033 + L1-Ta germline . no 192 PHACTR1
srip107545 chr6 13503049 13503049 + L1-Ta germline . no 192 .
srip108089 chr6 32613444 32613444 + L1-Ta germline . no 192 .
srip108129 chr6 33728772 33728772 - L1-Ta germline . no 192 .
srip108272 chr6 45852697 45852697 - L1-Ta germline . no 192 .
srip108667 chr6 46310291 46310291 + L1-Ta germline . no 192 .
srip109186 chr6 61942547 61942547 - L1-Ta germline . no 192 .
srip109548 chr6 63368207 63368207 + L1-Ta germline . no 192 .
srip109812 chr6 65477020 65477020 - L1-Ta germline . no 192 EYS
srip109955 chr6 68112755 68112755 - L1-Ta germline . no 192 .
srip111075 chr6 77980650 77980650 - L1-Ta germline . no 192 .
srip111208 chr6 78649689 78649689 - L1-Ta germline . no 192 .
srip113016 chr6 114091140 114091140 + L1-Ta germline . no 192 LOC100652953
srip113431 chr6 125692061 125692061 + L1-Ta germline . no 192 .
srip113766 chr6 142450101 142450101 - L1-Ta germline . no 192 .
srip114729 chr6 148195789 148195789 + L1-Ta germline . no 192 .
srip114879 chr6 154215663 154215663 + L1-Ta germline . no 192 .
srip115074 chr6 157968737 157968737 - L1-Ta germline . no 192 ZDHHC14
srip115553 chr6 162181257 162181257 + L1-Ta germline . no 192 PARK2
srip116123 chr7 8019027 8019027 + L1-Ta germline . no 192 GLCCI1
srip117482 chr7 52789472 52789472 + L1-Ta germline . no 192 .
srip117930 chr7 61079049 61079049 + L1-Ta germline . no 192 .
srip118189 chr7 62492930 62492930 + L1-Ta germline . no 192 .
srip119855 chr7 84901724 84901724 - L1-Ta germline . no 192 .
srip120225 chr7 85044737 85044737 + L1-Ta germline . no 192 .
srip121179 chr7 107410719 107410719 - L1-Ta germline . no 192 SLC26A3
srip121787 chr7 107829263 107829263 + L1-Ta germline . no 192 NRCAM
srip121987 chr7 108325661 108325661 + L1-Ta germline . no 192 .
srip122246 chr7 110484749 110484749 + L1-Ta germline . no 192 IMMP2L
srip122460 chr7 112789623 112789623 - L1-Ta germline . no 192 .
srip122688 chr7 124451334 124451334 - L1-Ta germline . no 192 .
srip123343 chr7 142818667 142818667 + L1-Ta germline . no 192 .
srip124556 chr8 5829283 5829283 - L1-Ta germline . no 192 .
srip124830 chr8 11164185 11164185 - L1-Ta germline . no 192 MTMR9
srip125049 chr8 21496230 21496230 + L1-Ta germline . no 192 .
srip125417 chr8 24926545 24926545 - L1-Ta germline . no 192 .
srip127325 chr8 72399221 72399221 - L1-Ta germline . no 192 .
srip127639 chr8 80067242 80067242 + L1-Ta germline . no 192 .
srip127641 chr8 80078792 80078792 + L1-Ta germline . no 192 .
srip128189 chr8 85428622 85428622 + L1-Ta germline . no 192 RALYL
srip128236 chr8 87315040 87315040 + L1-Ta germline . no 192 .
srip128769 chr8 107557032 107557032 - L1-Ta germline . no 192 OXR1
srip129665 chr8 119721703 119721703 - L1-Ta germline . no 192 SAMD12-AS1
srip130598 chr9 5023901 5023901 - L1-Ta germline . no 192 JAK2
srip130729 chr9 5491418 5491418 + L1-Ta germline . no 192 .
srip131135 chr9 6290494 6290494 + L1-Ta germline . no 192 .
srip133442 chr9 32463894 32463894 - L1-Ta germline . no 192 DDX58
srip133675 chr9 35883708 35883708 + L1-Ta germline . no 192 .
srip133829 chr9 68420861 68420861 - L1-Ta germline . no 192 .
srip134683 chr9 100675534 100675534 - L1-Ta germline . no 192 C9orf156
srip135984 chr9 118083880 118083880 - L1-Ta germline . no 192 DEC1
srip136159 chr9 136105857 136105857 - L1-Ta germline . no 192 .
srip138336 chrX 66982754 66982754 - L1-Ta germline . no 192 .
srip141129 chrX 123612276 123612276 - L1-Ta germline . no 192 ODZ1