euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

212 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip594 chr1 44736471 44736471 - L1-Ta germline . no 191 ERI3
srip844 chr1 56405398 56405398 - L1-Ta germline . no 191 LOC100507652
srip1137 chr1 58815122 58815122 - L1-Ta germline . no 191 .
srip2000 chr1 81855783 81855783 + L1-Ta germline . no 191 .
srip3621 chr1 114046370 114046370 + L1-Ta germline . no 191 MAGI3
srip3712 chr1 116980828 116980828 - L1-Ta germline . no 191 .
srip4036 chr1 149216797 149216797 + L1-Ta germline . no 191 .
srip5410 chr1 179575362 179575362 - L1-Ta germline . no 191 TDRD5
srip6272 chr1 194934648 194934648 - L1-Ta germline validated no 191 .
srip6364 chr1 207579511 207579511 + L1-Ta germline . no 191 .
srip7455 chr1 248454039 248454039 - L1-pre-Ta germline . no 191 .
srip7689 chr10 9525646 9525646 + L1-Ta germline . no 191 .
srip8419 chr10 25707687 25707687 - L1-Ta germline . no 191 GPR158
srip8646 chr10 27775762 27775762 + L1-Ta germline . no 191 .
srip9588 chr10 68949325 68949325 + L1-Ta germline . no 191 CTNNA3
srip9683 chr10 74767506 74767506 - L1-Ta germline . no 191 P4HA1
srip9989 chr10 85015980 85015980 + L1-Ta germline . no 191 .
srip10583 chr10 91717634 91717634 - L1-Ta germline . no 191 .
srip10660 chr10 94707828 94707828 - L1-Ta germline . no 191 EXOC6
srip11203 chr10 110453470 110453470 + L1-Ta germline . no 191 .
srip11854 chr10 124455231 124455231 + L1-Ta germline . no 191 .
srip12864 chr11 25123354 25123354 - L1-Ta germline . no 191 .
srip13788 chr11 33670123 33670123 + L1-Ta germline . no 191 C11orf41
srip14560 chr11 43356955 43356955 + L1-Ta germline . no 191 API5
srip14757 chr11 48360753 48360753 - L1-Ta germline . no 191 .
srip17202 chr11 94684368 94684368 + L1-Ta germline . no 191 .
srip19315 chr11 134305648 134305648 - L1-Ta germline . no 191 .
srip20458 chr12 25775841 25775841 - L1-Ta germline . no 191 IFLTD1
srip20713 chr12 28226413 28226413 - L1-Ta germline . no 191 .
srip21158 chr12 34017325 34017325 - L1-Ta germline . no 191 .
srip21740 chr12 38035076 38035076 + L1-Ta germline . no 191 .
srip22254 chr12 43256986 43256986 - L1-Ta germline . no 191 .
srip24426 chr12 84955216 84955216 - L1-Ta germline . no 191 .
srip24641 chr12 84965148 84965148 + L1-Ta germline . no 191 .
srip25130 chr12 95808527 95808527 - L1-Ta germline . no 191 .
srip25253 chr12 98669929 98669929 + L1-Ta germline . no 191 .
srip25638 chr12 117814447 117814447 - L1-Ta germline . no 191 .
srip26001 chr12 118186926 118186926 + L1-Ta germline . no 191 KSR2
srip27010 chr13 22489805 22489805 + L1-Ta germline . no 191 .
srip27481 chr13 27488126 27488126 + L1-Ta germline . no 191 .
srip28167 chr13 48856541 48856541 + L1-Ta germline . no 191 .
srip29046 chr13 61462336 61462336 - L1-Ta germline . no 191 .
srip29618 chr13 61734485 61734485 + L1-Ta germline . no 191 .
srip31018 chr13 79259793 79259793 - L1-Ta germline . no 191 .
srip31424 chr13 85871602 85871602 - L1-Ta germline . no 191 .
srip32014 chr13 86340153 86340153 - L1-Ta germline . no 191 .
srip32303 chr13 91149409 91149409 - L1-Ta germline . no 191 .
srip33493 chr13 104296223 104296223 - L1-Ta germline . no 191 .
srip33650 chr13 104395943 104395943 - L1-Ta germline . no 191 .
srip33792 chr13 105280146 105280146 - L1-Ta germline . no 191 .
srip34284 chr14 19000969 19000969 + L1-Ta germline . no 191 .
srip35246 chr14 28301261 28301261 + L1-Ta germline . no 191 .
srip35459 chr14 31150809 31150809 - L1-Ta germline . no 191 SCFD1
srip35565 chr14 34140125 34140125 - L1-Ta germline . no 191 NPAS3
srip36029 chr14 36674760 36674760 + L1-Ta germline . no 191 .
srip37149 chr14 52667758 52667758 - L1-Ta germline . no 191 .
srip38607 chr14 86381796 86381796 - L1-Ta germline . no 191 .
srip39004 chr15 20116653 20116653 + L1-Ta germline . no 191 .
srip39329 chr15 28175791 28175791 - L1-Ta germline . no 191 OCA2
srip39506 chr15 34031839 34031839 - L1-Ta germline . no 191 RYR3
srip39750 chr15 37707890 37707890 - L1-Ta germline . no 191 .
srip40212 chr15 47507329 47507329 - L1-Ta germline . no 191 SEMA6D
srip41244 chr15 56251153 56251153 + L1-Ta germline . no 191 NEDD4
srip41719 chr15 62169638 62169638 - L1-Ta germline . no 191 VPS13C
srip44773 chr16 32523893 32523893 - L1-Ta germline . no 191 .
srip45055 chr16 32525611 32525611 - L1-Ta germline . no 191 .
srip45480 chr16 33992430 33992430 + L1-Ta germline . no 191 .
srip45870 chr16 61079188 61079188 + L1-Ta germline . no 191 .
srip46550 chr17 6341644 6341644 - L1-Ta germline . no 191 .
srip47357 chr17 28398313 28398313 + L1-Ta germline . no 191 EFCAB5
srip48165 chr17 64637294 64637294 + L1-Ta germline . no 191 PRKCA
srip49226 chr18 27219200 27219200 - L1-Ta germline . no 191 .
srip50142 chr18 50097742 50097742 - L1-Ta germline . no 191 DCC
srip50716 chr18 51762730 51762730 - L1-Ta germline . no 191 .
srip51821 chr18 74960068 74960068 - L1-Ta germline . no 191 .
srip52443 chr19 45444699 45444699 + L1-Ta germline . no 191 .
srip52766 chr2 6798288 6798288 - L1-Ta germline . no 191 .
srip52809 chr2 7050603 7050603 + L1-Ta germline . no 191 .
srip52822 chr2 10946157 10946157 + L1-Ta germline . no 191 PDIA6
srip53433 chr2 23191000 23191000 - L1-Ta germline . no 191 .
srip53678 chr2 24796757 24796757 + L1-Ta germline . no 191 .
srip54597 chr2 42051403 42051403 + L1-Ta germline . no 191 .
srip54919 chr2 53460052 53460052 + L1-Ta germline . no 191 .
srip57662 chr2 129372166 129372166 + L1-Ta germline . no 191 .
srip57813 chr2 132868182 132868182 - L1-Ta germline . no 191 .
srip58211 chr2 141852908 141852908 - L1-Ta germline . no 191 LRP1B
srip59884 chr2 173854096 173854096 - L1-Ta germline . no 191 RAPGEF4
srip60133 chr2 178676245 178676245 - L1-Ta germline . no 191 PDE11A
srip60487 chr2 181000540 181000540 + L1-Ta germline . no 191 .
srip60799 chr2 191478714 191478714 - L1-Ta germline . no 191 .
srip62168 chr2 221503768 221503768 - L1-Ta germline . no 191 .
srip64007 chr20 25844027 25844027 + L1-Ta germline . no 191 .
srip64795 chr20 41952105 41952105 - L1-Ta germline . no 191 .
srip65255 chr20 59972453 59972453 + L1-Ta germline . no 191 CDH4
srip66031 chr21 19517313 19517313 - L1-Ta germline . no 191 .
srip66257 chr21 23626191 23626191 - L1-Ta germline . no 191 .
srip66865 chr21 29069171 29069171 + L1-Ta germline . no 191 .
srip67901 chr22 28455902 28455902 - L1-Ta germline . no 191 TTC28
srip68897 chr22 44324605 44324605 - L1-Ta germline . no 191 PNPLA3
srip69636 chr3 656435 656435 - L1-Ta germline . no 191 .
srip70069 chr3 17409573 17409573 - L1-Ta germline . no 191 TBC1D5
srip70800 chr3 24987874 24987874 - L1-Ta germline . no 191 .
srip71161 chr3 26524464 26524464 - L1-Ta germline . no 191 .
srip71923 chr3 38626082 38626082 + L1-Ta germline . no 191 SCN5A
srip72742 chr3 55788580 55788580 + L1-Ta germline . no 191 ERC2
srip73780 chr3 75101216 75101216 + L1-Ta germline . no 191 .
srip75608 chr3 85576568 85576568 + L1-Ta germline . no 191 CADM2
srip75902 chr3 89022346 89022346 - L1-Ta germline . no 191 .
srip76438 chr3 105316337 105316337 + L1-Ta germline . no 191 .
srip76615 chr3 109751770 109751770 + L1-Ta germline . no 191 .
srip76696 chr3 111275065 111275065 + L1-Ta germline . no 191 CD96
srip76814 chr3 119046413 119046413 + L1-Ta germline . no 191 ARHGAP31
srip78146 chr3 143121759 143121759 - L1-Ta germline . no 191 SLC9A9
srip78599 chr3 151148544 151148544 - L1-Ta germline . no 191 MED12L
srip79321 chr3 162717306 162717306 + L1-Ta germline . no 191 .
srip80395 chr3 176091333 176091333 + L1-Ta germline . no 191 .
srip81517 chr3 186372141 186372141 + L1-Ta germline . no 191 .
srip81645 chr3 187835309 187835309 - L1-Ta germline . no 191 .
srip83118 chr4 18162689 18162689 - L1-Ta germline . no 191 .
srip83344 chr4 20246382 20246382 + L1-Ta germline . no 191 .
srip83835 chr4 29321851 29321851 + L1-Ta germline . no 191 .
srip85451 chr4 57497067 57497067 - L1-Ta germline . no 191 .
srip85823 chr4 58917529 58917529 - L1-Ta germline . no 191 .
srip86198 chr4 66413932 66413932 + L1-Ta germline . no 191 EPHA5
srip86354 chr4 66809078 66809078 - L1-Ta germline . no 191 .
srip86619 chr4 69572737 69572737 - L1-Ta germline . no 191 LOC728811
srip87706 chr4 82921896 82921896 + L1-Ta germline . no 191 .
srip88824 chr4 103343746 103343746 + L1-Ta germline . no 191 .
srip89047 chr4 104597401 104597401 + L1-Ta germline . no 191 TACR3
srip89595 chr4 110248316 110248316 - L1-Ta germline . no 191 .
srip89668 chr4 110248332 110248332 - L1-Ta germline . no 191 .
srip89992 chr4 112628973 112628973 + L1-Ta germline . no 191 .
srip90294 chr4 115132695 115132695 + L1-Ta germline . no 191 .
srip92219 chr4 134596423 134596423 + L1-Ta germline . no 191 .
srip92772 chr4 138177325 138177325 + L1-Ta germline . no 191 .
srip92917 chr4 146927741 146927741 - L1-Ta germline . no 191 .
srip93110 chr4 147225296 147225296 + L1-Ta germline . no 191 SLC10A7
srip93860 chr4 158907272 158907272 - L1-Ta germline . no 191 .
srip95474 chr5 1645773 1645773 + L1-Ta germline . no 191 .
srip96052 chr5 8749515 8749515 + L1-Ta germline . no 191 .
srip96361 chr5 11391276 11391276 + L1-Ta germline . no 191 CTNND2
srip97956 chr5 33633348 33633348 - L1-Ta germline . no 191 ADAMTS12
srip98031 chr5 33797544 33797544 - L1-Ta germline . no 191 ADAMTS12
srip98172 chr5 38599852 38599852 + L1-Ta germline . no 191 LOC100506495
srip98604 chr5 46396964 46396964 + L1-Ta germline . no 191 .
srip99491 chr5 68263461 68263461 - L1-Ta germline . no 191 .
srip99763 chr5 83619783 83619783 - L1-Ta germline . no 191 EDIL3
srip100080 chr5 84239673 84239673 - L1-Ta germline . no 191 .
srip100769 chr5 89450781 89450781 + L1-Ta germline . no 191 .
srip101064 chr5 96866407 96866407 + L1-Ta germline . no 191 .
srip102253 chr5 109480258 109480258 - L1-Ta germline . no 191 .
srip103374 chr5 125040045 125040045 + L1-Ta germline . no 191 .
srip104837 chr5 154873933 154873933 - L1-Ta germline . no 191 .
srip105575 chr5 159351199 159351199 - L1-Ta germline . no 191 ADRA1B
srip107085 chr6 13191033 13191033 + L1-Ta germline . no 191 PHACTR1
srip107544 chr6 13503049 13503049 + L1-Ta germline . no 191 .
srip108088 chr6 32613444 32613444 + L1-Ta germline . no 191 .
srip108103 chr6 32638838 32638838 - L1-Ta germline . no 191 .
srip108128 chr6 33728772 33728772 - L1-Ta germline . no 191 .
srip108271 chr6 45852697 45852697 - L1-Ta germline . no 191 .
srip108666 chr6 46310291 46310291 + L1-Ta germline . no 191 .
srip109178 chr6 61902641 61902641 + L1-Ta germline . no 191 .
srip109185 chr6 61942547 61942547 - L1-Ta germline . no 191 .
srip109547 chr6 63368207 63368207 + L1-Ta germline . no 191 .
srip109811 chr6 65477020 65477020 - L1-Ta germline . no 191 EYS
srip109954 chr6 68112755 68112755 - L1-Ta germline . no 191 .
srip111074 chr6 77980650 77980650 - L1-Ta germline . no 191 .
srip111207 chr6 78649689 78649689 - L1-Ta germline . no 191 .
srip113015 chr6 114091140 114091140 + L1-Ta germline . no 191 LOC100652953
srip113430 chr6 125692061 125692061 + L1-Ta germline . no 191 .
srip113765 chr6 142450101 142450101 - L1-Ta germline . no 191 .
srip114728 chr6 148195789 148195789 + L1-Ta germline . no 191 .
srip114878 chr6 154215663 154215663 + L1-Ta germline . no 191 .
srip115073 chr6 157968737 157968737 - L1-Ta germline . no 191 ZDHHC14
srip115552 chr6 162181257 162181257 + L1-Ta germline . no 191 PARK2
srip116122 chr7 8019027 8019027 + L1-Ta germline . no 191 GLCCI1
srip117481 chr7 52789472 52789472 + L1-Ta germline . no 191 .
srip118188 chr7 62492930 62492930 + L1-Ta germline . no 191 .
srip119854 chr7 84901724 84901724 - L1-Ta germline . no 191 .
srip120224 chr7 85044737 85044737 + L1-Ta germline . no 191 .
srip121786 chr7 107829263 107829263 + L1-Ta germline . no 191 NRCAM
srip122245 chr7 110484749 110484749 + L1-Ta germline . no 191 IMMP2L
srip122371 chr7 112789594 112789594 - L1-Ta germline . no 191 .
srip122459 chr7 112789623 112789623 - L1-Ta germline . no 191 .
srip122687 chr7 124451334 124451334 - L1-Ta germline . no 191 .
srip124555 chr8 5829283 5829283 - L1-Ta germline . no 191 .
srip124829 chr8 11164185 11164185 - L1-Ta germline . no 191 MTMR9
srip125416 chr8 24926545 24926545 - L1-Ta germline . no 191 .
srip127324 chr8 72399221 72399221 - L1-Ta germline . no 191 .
srip127638 chr8 80067242 80067242 + L1-Ta germline . no 191 .
srip127640 chr8 80078792 80078792 + L1-Ta germline . no 191 .
srip128188 chr8 85428622 85428622 + L1-Ta germline . no 191 RALYL
srip128235 chr8 87315040 87315040 + L1-Ta germline . no 191 .
srip128768 chr8 107557032 107557032 - L1-Ta germline . no 191 OXR1
srip129664 chr8 119721703 119721703 - L1-Ta germline . no 191 SAMD12-AS1
srip130597 chr9 5023901 5023901 - L1-Ta germline . no 191 JAK2
srip130728 chr9 5491418 5491418 + L1-Ta germline . no 191 .
srip131134 chr9 6290494 6290494 + L1-Ta germline . no 191 .
srip132929 chr9 32092748 32092748 - L1-Ta germline . no 191 .
srip133441 chr9 32463894 32463894 - L1-Ta germline . no 191 DDX58
srip133674 chr9 35883708 35883708 + L1-Ta germline . no 191 .
srip133704 chr9 35883754 35883754 + L1-Ta germline . no 191 .
srip133828 chr9 68420861 68420861 - L1-Ta germline . no 191 .
srip134682 chr9 100675534 100675534 - L1-Ta germline . no 191 C9orf156
srip135983 chr9 118083880 118083880 - L1-Ta germline . no 191 DEC1
srip136158 chr9 136105857 136105857 - L1-Ta germline . no 191 .
srip136773 chrX 24384651 24384651 - L1-Ta germline . no 191 .
srip138335 chrX 66982754 66982754 - L1-Ta germline . no 191 .
srip141082 chrX 122664872 122664872 - L1-Ta germline . no 191 .
srip141474 chrX 130495439 130495439 - L1-Ta germline . no 191 .
srip142217 chrY 9951878 9951878 - L1-pre-Ta germline . no 191 .
srip142314 chrY 13653796 13653796 - L1-Ta germline . no 191 .