euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

232 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip164 chr1 30377070 30377070 - L1-Ta germline . no 190 .
srip1203 chr1 66471382 66471382 + L1-Ta germline . no 190 PDE4B
srip1999 chr1 81855783 81855783 + L1-Ta germline . no 190 .
srip2403 chr1 90914512 90914512 + L1-Ta germline validated no 190 .
srip3199 chr1 105028226 105028226 + L1-Ta germline . no 190 .
srip4245 chr1 157732949 157732949 + L1-Ta germline . no 190 FCRL2
srip5033 chr1 169524859 169524859 + L1-Ta germline . no 190 F5
srip5988 chr1 192262254 192262254 - L1-Ta germline . no 190 .
srip6012 chr1 192262268 192262268 - L1-Ta germline . no 190 .
srip6169 chr1 194552989 194552989 + L1-Ta germline . no 190 .
srip6312 chr1 198442492 198442492 + L1-Ta germline . no 190 .
srip6342 chr1 206609875 206609875 - L1-Ta germline . no 190 SRGAP2
srip6363 chr1 207579511 207579511 + L1-Ta germline . no 190 .
srip6396 chr1 210198291 210198291 - L1-Ta germline . no 190 SYT14
srip6400 chr1 210295340 210295340 - L1-Ta germline . no 190 SYT14
srip6927 chr1 221827821 221827821 - L1-Ta germline . no 190 .
srip6947 chr1 222579116 222579116 - L1-Ta germline . no 190 .
srip7819 chr10 19065785 19065785 - L1-Ta germline . no 190 .
srip9478 chr10 68178133 68178133 + L1-Ta germline . no 190 CTNNA3
srip9682 chr10 74767506 74767506 - L1-Ta germline . no 190 P4HA1
srip9981 chr10 83204799 83204799 - L1-pre-Ta germline . no 190 .
srip11497 chr10 122662191 122662191 + L1-Ta germline . no 190 WDR11
srip13269 chr11 30180463 30180463 + L1-Ta germline . no 190 .
srip14358 chr11 41831811 41831811 - L1-Ta germline . no 190 .
srip14399 chr11 41869861 41869861 + L1-Ta germline . no 190 .
srip14756 chr11 48360753 48360753 - L1-Ta germline . no 190 .
srip15038 chr11 50399980 50399980 - L1-Ta germline . no 190 .
srip17762 chr11 104556130 104556130 - L1-Ta germline . no 190 .
srip18518 chr11 123241794 123241794 + L1-Ta germline . no 190 .
srip19314 chr11 134305648 134305648 - L1-Ta germline . no 190 .
srip20712 chr12 28226413 28226413 - L1-Ta germline . no 190 .
srip21739 chr12 38035076 38035076 + L1-Ta germline . no 190 .
srip22821 chr12 48929052 48929052 + L1-Ta germline . no 190 .
srip22966 chr12 55782238 55782238 + L1-Ta germline . no 190 OR6C66P
srip23371 chr12 67443914 67443914 - L1-Ta germline . no 190 .
srip23376 chr12 67444346 67444346 + L1-Ta germline . no 190 .
srip24148 chr12 81917112 81917112 - L1-Ta germline . no 190 PPFIA2
srip24425 chr12 84955216 84955216 - L1-Ta germline . no 190 .
srip25129 chr12 95808527 95808527 - L1-Ta germline . no 190 .
srip26000 chr12 118186926 118186926 + L1-Ta germline . no 190 KSR2
srip26644 chr12 128777545 128777545 - L1-Ta germline . no 190 TMEM132C
srip27480 chr13 27488126 27488126 + L1-Ta germline . no 190 .
srip28044 chr13 46272505 46272505 + L1-Ta germline . no 190 .
srip28438 chr13 58556528 58556528 + L1-Ta germline . no 190 .
srip29045 chr13 61462336 61462336 - L1-Ta germline . no 190 .
srip29617 chr13 61734485 61734485 + L1-Ta germline . no 190 .
srip30390 chr13 72968682 72968682 + L1-Ta germline . no 190 .
srip30649 chr13 79009313 79009313 - L1-Ta germline . no 190 .
srip31017 chr13 79259793 79259793 - L1-Ta germline . no 190 .
srip31423 chr13 85871602 85871602 - L1-Ta germline . no 190 .
srip32256 chr13 89423371 89423371 - L1-Ta germline . no 190 .
srip32302 chr13 91149409 91149409 - L1-Ta germline . no 190 .
srip33492 chr13 104296223 104296223 - L1-Ta germline . no 190 .
srip33649 chr13 104395943 104395943 - L1-Ta germline . no 190 .
srip33791 chr13 105280146 105280146 - L1-Ta germline . no 190 .
srip34283 chr14 19000969 19000969 + L1-Ta germline . no 190 .
srip35245 chr14 28301261 28301261 + L1-Ta germline . no 190 .
srip35362 chr14 30854668 30854668 + L1-Ta germline . no 190 .
srip36028 chr14 36674760 36674760 + L1-Ta germline . no 190 .
srip36078 chr14 37769602 37769602 - L1-Ta germline . no 190 MIPOL1
srip36750 chr14 43668855 43668855 - L1-Ta germline . no 190 .
srip37854 chr14 67419863 67419863 - L1-Ta germline . no 190 GPHN
srip37948 chr14 68784244 68784244 + L1-Ta germline . no 190 RAD51B
srip38380 chr14 81477209 81477209 - L1-Ta germline . no 190 TSHR
srip38411 chr14 86149599 86149599 + L1-Ta germline . no 190 .
srip39029 chr15 22412531 22412531 - L1-Ta germline . no 190 .
srip39505 chr15 34031839 34031839 - L1-Ta germline . no 190 RYR3
srip39616 chr15 35654131 35654131 - L1-Ta germline . no 190 .
srip40211 chr15 47507329 47507329 - L1-Ta germline . no 190 SEMA6D
srip41645 chr15 61328974 61328974 - L1-Ta germline . no 190 RORA
srip43049 chr15 98622504 98622504 + L1-Ta germline . no 190 .
srip43640 chr16 6793831 6793831 + L1-Ta germline . no 190 RBFOX1
srip44772 chr16 32523893 32523893 - L1-Ta germline . no 190 .
srip45054 chr16 32525611 32525611 - L1-Ta germline . no 190 .
srip45479 chr16 33992430 33992430 + L1-Ta germline . no 190 .
srip45578 chr16 51803074 51803074 + L1-Ta germline . no 190 .
srip45869 chr16 61079188 61079188 + L1-Ta germline . no 190 .
srip46360 chr16 71294354 71294354 + L1-Ta germline . no 190 .
srip47356 chr17 28398313 28398313 + L1-Ta germline . no 190 EFCAB5
srip48892 chr18 12491262 12491262 + L1-Ta germline . no 190 SPIRE1
srip49225 chr18 27219200 27219200 - L1-Ta germline . no 190 .
srip50004 chr18 49216219 49216219 - L1-Ta germline . no 190 .
srip50343 chr18 51425726 51425726 - L1-Ta germline . no 190 .
srip50715 chr18 51762730 51762730 - L1-Ta germline . no 190 .
srip50887 chr18 58255673 58255673 + L1-Ta germline . no 190 .
srip51242 chr18 64979039 64979039 + L1-Ta germline . no 190 .
srip52418 chr19 44979614 44979614 + L1-Ta germline . no 190 .
srip52857 chr2 11949281 11949281 + L1-Ta germline . no 190 LPIN1
srip53432 chr2 23191000 23191000 - L1-Ta germline . no 190 .
srip53759 chr2 35760013 35760013 - L1-Ta germline . no 190 .
srip54596 chr2 42051403 42051403 + L1-Ta germline . no 190 .
srip54764 chr2 49386669 49386669 - L1-Ta germline validated no 190 .
srip54918 chr2 53460052 53460052 + L1-Ta germline . no 190 .
srip55034 chr2 65721223 65721223 - L1-Ta germline . no 190 .
srip55300 chr2 69168896 69168896 - L1-Ta germline . no 190 .
srip56500 chr2 83188325 83188325 + L1-Ta germline . no 190 .
srip56757 chr2 102912450 102912450 + L1-Ta germline . no 190 .
srip57812 chr2 132868182 132868182 - L1-Ta germline . no 190 .
srip58210 chr2 141852908 141852908 - L1-Ta germline . no 190 LRP1B
srip59495 chr2 154100589 154100589 - L1-Ta germline . no 190 .
srip59895 chr2 174534171 174534171 + L1-Ta germline . no 190 .
srip60132 chr2 178676245 178676245 - L1-Ta germline . no 190 PDE11A
srip61288 chr2 205599773 205599773 - L1-Ta germline . no 190 PARD3B
srip61919 chr2 221278223 221278223 - L1-Ta germline . no 190 .
srip62466 chr2 232482740 232482740 + L1-Ta germline . no 190 .
srip63108 chr20 7829082 7829082 + L1-Ta germline . no 190 .
srip63192 chr20 9477925 9477925 - L1-Ta germline . no 190 .
srip63644 chr20 17860937 17860937 + L1-Ta germline . no 190 .
srip63930 chr20 22501649 22501649 + L1-Ta germline . no 190 .
srip65615 chr21 17134462 17134462 + L1-Ta germline . no 190 USP25
srip65626 chr21 18145832 18145832 + L1-Ta germline . no 190 .
srip66030 chr21 19517313 19517313 - L1-Ta germline . no 190 .
srip66256 chr21 23626191 23626191 - L1-Ta germline . no 190 .
srip66864 chr21 29069171 29069171 + L1-Ta germline . no 190 .
srip67444 chr22 22486369 22486369 - L1-Ta germline . no 190 IGL@
srip67832 chr22 22715588 22715588 + L1-Ta germline . no 190 IGL@
srip70068 chr3 17409573 17409573 - L1-Ta germline . no 190 TBC1D5
srip70618 chr3 21800882 21800882 + L1-Ta germline . no 190 .
srip70817 chr3 25278891 25278891 - L1-Ta germline . no 190 .
srip71160 chr3 26524464 26524464 - L1-Ta germline . no 190 .
srip73411 chr3 59852903 59852903 + L1-Ta germline . no 190 FHIT
srip73779 chr3 75101216 75101216 + L1-Ta germline . no 190 .
srip74844 chr3 82144854 82144854 - L1-Ta germline . no 190 .
srip74964 chr3 83613997 83613997 + L1-Ta germline . no 190 .
srip75324 chr3 84593288 84593288 - L1-Ta germline . no 190 .
srip75675 chr3 85663354 85663354 - L1-Ta germline . no 190 CADM2
srip75901 chr3 89022346 89022346 - L1-Ta germline . no 190 .
srip76098 chr3 98775485 98775485 - L1-Ta germline . no 190 .
srip76437 chr3 105316337 105316337 + L1-Ta germline . no 190 .
srip76813 chr3 119046413 119046413 + L1-Ta germline . no 190 ARHGAP31
srip77277 chr3 123590726 123590726 + L1-Ta germline . no 190 MYLK
srip77501 chr3 131069779 131069779 + L1-Ta germline . no 190 LOC339874
srip78276 chr3 144610072 144610072 - L1-Ta germline . no 190 .
srip78598 chr3 151148544 151148544 - L1-Ta germline . no 190 MED12L
srip80394 chr3 176091333 176091333 + L1-Ta germline . no 190 .
srip80450 chr3 180091672 180091672 + L1-Ta germline . no 190 .
srip81516 chr3 186372141 186372141 + L1-Ta germline . no 190 .
srip81644 chr3 187835309 187835309 - L1-Ta germline . no 190 .
srip83343 chr4 20246382 20246382 + L1-Ta germline . no 190 .
srip84074 chr4 40966470 40966470 + L1-Ta germline . no 190 APBB2
srip84884 chr4 47007790 47007790 - L1-Ta germline . no 190 .
srip85132 chr4 53628490 53628490 + L1-Ta germline . no 190 .
srip85450 chr4 57497067 57497067 - L1-Ta germline . no 190 .
srip86197 chr4 66413932 66413932 + L1-Ta germline . no 190 EPHA5
srip86618 chr4 69572737 69572737 - L1-Ta germline . no 190 LOC728811
srip87352 chr4 80768541 80768541 + L1-Ta germline . no 190 GDEP
srip87823 chr4 85317459 85317459 - L1-Ta germline . no 190 .
srip87837 chr4 85317475 85317475 - L1-Ta germline . no 190 .
srip88823 chr4 103343746 103343746 + L1-Ta germline . no 190 .
srip89594 chr4 110248316 110248316 - L1-Ta germline . no 190 .
srip89667 chr4 110248332 110248332 - L1-Ta germline . no 190 .
srip89991 chr4 112628973 112628973 + L1-Ta germline . no 190 .
srip90293 chr4 115132695 115132695 + L1-Ta germline . no 190 .
srip90626 chr4 118332411 118332411 - L1-Ta germline . no 190 .
srip91125 chr4 126824141 126824141 + L1-Ta germline . no 190 .
srip91149 chr4 127275367 127275367 + L1-Ta germline . no 190 .
srip92268 chr4 135420700 135420700 + L1-Ta germline . no 190 .
srip92771 chr4 138177325 138177325 + L1-Ta germline . no 190 .
srip93109 chr4 147225296 147225296 + L1-Ta germline . no 190 SLC10A7
srip95073 chr4 182418058 182418058 - L1-Ta germline . no 190 .
srip95473 chr5 1645773 1645773 + L1-Ta germline . no 190 .
srip96360 chr5 11391276 11391276 + L1-Ta germline . no 190 CTNND2
srip96790 chr5 16883042 16883042 - L1-Ta germline . no 190 MYO10
srip97022 chr5 24136010 24136010 - L1-Ta germline . no 190 .
srip97955 chr5 33633348 33633348 - L1-Ta germline . no 190 ADAMTS12
srip98313 chr5 41428535 41428535 + L1-Ta germline . no 190 PLCXD3
srip98603 chr5 46396964 46396964 + L1-Ta germline . no 190 .
srip98641 chr5 49435042 49435042 - L1-Ta germline . no 190 .
srip99110 chr5 57279517 57279517 + L1-Ta germline . no 190 .
srip100768 chr5 89450781 89450781 + L1-Ta germline . no 190 .
srip102252 chr5 109480258 109480258 - L1-Ta germline . no 190 .
srip102529 chr5 109567542 109567542 + L1-Ta germline . no 190 .
srip102772 chr5 115449063 115449063 - L1-pre-Ta germline . no 190 COMMD10
srip103415 chr5 130257380 130257380 + L1-Ta germline . no 190 .
srip105230 chr5 155619865 155619865 + L1-Ta germline . no 190 .
srip107756 chr6 22670019 22670019 - L1-pre-Ta germline . no 190 .
srip108087 chr6 32613444 32613444 + L1-Ta germline . no 190 .
srip108102 chr6 32638838 32638838 - L1-Ta germline . no 190 .
srip108954 chr6 56729315 56729315 - L1-Ta germline . no 190 LOC100652827
srip109184 chr6 61942547 61942547 - L1-Ta germline . no 190 .
srip109792 chr6 65412808 65412808 + L1-Ta germline . no 190 EYS
srip109953 chr6 68112755 68112755 - L1-Ta germline . no 190 .
srip110670 chr6 77379922 77379922 - L1-Ta germline . no 190 .
srip112177 chr6 91669521 91669521 - L1-Ta germline . no 190 .
srip112356 chr6 94263991 94263991 + L1-Ta germline . no 190 .
srip112386 chr6 98096213 98096213 + L1-Ta germline . no 190 .
srip112397 chr6 98652124 98652124 - L1-pre-Ta germline . no 190 .
srip112959 chr6 113480552 113480552 + L1-Ta germline . no 190 .
srip114877 chr6 154215663 154215663 + L1-Ta germline . no 190 .
srip115072 chr6 157968737 157968737 - L1-Ta germline . no 190 ZDHHC14
srip116413 chr7 20170322 20170322 + L1-Ta germline . no 190 .
srip117078 chr7 45485689 45485689 + L1-Ta germline . no 190 .
srip117230 chr7 52221997 52221997 - L1-Ta germline . no 190 .
srip117480 chr7 52789472 52789472 + L1-Ta germline . no 190 .
srip117962 chr7 61778308 61778308 - L1-Ta germline . no 190 .
srip118187 chr7 62492930 62492930 + L1-Ta germline . no 190 .
srip119853 chr7 84901724 84901724 - L1-Ta germline . no 190 .
srip120703 chr7 92857576 92857576 - L1-Ta germline . no 190 .
srip121141 chr7 105967895 105967895 + L1-Ta germline . no 190 .
srip122297 chr7 111232935 111232935 - L1-Ta germline . no 190 .
srip122666 chr7 124261736 124261736 + L1-Ta germline . no 190 .
srip122696 chr7 125291681 125291681 + L1-Ta germline . no 190 .
srip123342 chr7 142818667 142818667 + L1-Ta germline . no 190 .
srip123770 chr7 157335125 157335125 + L1-Ta germline . no 190 PTPRN2
srip124040 chr8 4452894 4452894 - L1-Ta germline . no 190 CSMD1
srip124554 chr8 5829283 5829283 - L1-Ta germline . no 190 .
srip125705 chr8 38193063 38193063 + L1-Ta germline validated no 190 WHSC1L1
srip125775 chr8 40433176 40433176 - L1-Ta germline . no 190 ZMAT4
srip126403 chr8 58347940 58347940 + L1-Ta germline . no 190 .
srip126916 chr8 67381885 67381885 - L1-Ta germline . no 190 .
srip128096 chr8 85023896 85023896 - L1-Ta germline . no 190 .
srip128187 chr8 85428622 85428622 + L1-Ta germline . no 190 RALYL
srip128847 chr8 111632621 111632621 + L1-Ta germline . no 190 .
srip129014 chr8 115773126 115773126 + L1-Ta germline . no 190 .
srip131133 chr9 6290494 6290494 + L1-Ta germline . no 190 .
srip131541 chr9 9236600 9236600 + L1-Ta germline . no 190 PTPRD
srip132402 chr9 30495887 30495887 - L1-Ta germline . no 190 .
srip132623 chr9 30674468 30674468 - L1-Ta germline . no 190 .
srip133440 chr9 32463894 32463894 - L1-Ta germline . no 190 DDX58
srip133673 chr9 35883708 35883708 + L1-Ta germline . no 190 .
srip133827 chr9 68420861 68420861 - L1-Ta germline . no 190 .
srip133908 chr9 71190135 71190135 - L1-Ta germline . no 190 .
srip134229 chr9 82082793 82082793 - L1-Ta germline . no 190 .
srip136035 chr9 121394590 121394590 - L1-Ta germline . no 190 .
srip136215 chrX 3879104 3879104 - L1-Ta germline . no 190 .
srip139491 chrX 94852538 94852538 - L1-Ta germline . no 190 .
srip141110 chrX 123611800 123611800 + L1-Ta germline . no 190 ODZ1
srip141128 chrX 123612276 123612276 - L1-Ta germline . no 190 ODZ1
srip141963 chrX 140515258 140515258 - L1-Ta germline . no 190 .
srip142027 chrX 143704684 143704684 + L1-Ta germline . no 190 .
srip142216 chrY 9951878 9951878 - L1-pre-Ta germline . no 190 .
srip142313 chrY 13653796 13653796 - L1-Ta germline . no 190 .