euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

220 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1927 chr1 75192907 75192907 - L1-Ta germline validated no 188 CRYZ
srip1997 chr1 81855783 81855783 + L1-Ta germline . no 188 .
srip3326 chr1 106396428 106396428 - L1-Ta germline . no 188 .
srip3620 chr1 114046370 114046370 + L1-Ta germline . no 188 MAGI3
srip4035 chr1 149216797 149216797 + L1-Ta germline . no 188 .
srip4742 chr1 165553136 165553136 - L1-Ta germline . no 188 .
srip5031 chr1 169524859 169524859 + L1-Ta germline . no 188 F5
srip5409 chr1 179575362 179575362 - L1-Ta germline . no 188 TDRD5
srip5548 chr1 183969672 183969672 - L1-Ta germline . no 188 GLT25D2
srip5987 chr1 192262254 192262254 - L1-Ta germline . no 188 .
srip6010 chr1 192262268 192262268 - L1-Ta germline . no 188 .
srip6361 chr1 207579511 207579511 + L1-Ta germline . no 188 .
srip7251 chr1 241262724 241262724 - L1-pre-Ta germline . no 188 RGS7
srip7403 chr1 242311577 242311577 + L1-Ta germline validated no 188 PLD5
srip7817 chr10 19065785 19065785 - L1-Ta germline . no 188 .
srip8177 chr10 23842058 23842058 - L1-Ta germline . no 188 .
srip8418 chr10 25707687 25707687 - L1-Ta germline . no 188 GPR158
srip8645 chr10 27775762 27775762 + L1-Ta germline . no 188 .
srip9680 chr10 74767506 74767506 - L1-Ta germline . no 188 P4HA1
srip11853 chr10 124455231 124455231 + L1-Ta germline . no 188 .
srip11961 chr10 131468402 131468402 - L1-Ta germline . no 188 MGMT
srip12247 chr11 7285032 7285032 - L1-Ta germline . no 188 SYT9
srip12863 chr11 25123354 25123354 - L1-Ta germline . no 188 .
srip13060 chr11 26418541 26418541 + L1-Ta germline . no 188 ANO3
srip13787 chr11 33670123 33670123 + L1-Ta germline . no 188 C11orf41
srip14356 chr11 41831811 41831811 - L1-Ta germline . no 188 .
srip14559 chr11 43356955 43356955 + L1-Ta germline . no 188 API5
srip14754 chr11 48360753 48360753 - L1-Ta germline . no 188 .
srip15105 chr11 55011014 55011014 + L1-Ta germline . no 188 .
srip15166 chr11 57985411 57985411 + L1-Ta germline . no 188 .
srip15350 chr11 58171838 58171838 + L1-Ta germline . no 188 .
srip15499 chr11 58570969 58570969 - L1-Ta germline . no 188 .
srip16801 chr11 88002109 88002109 - L1-Ta germline . no 188 .
srip18601 chr11 128367821 128367821 - L1-Ta germline . no 188 ETS1
srip19312 chr11 134305648 134305648 - L1-Ta germline . no 188 .
srip19661 chr12 8105629 8105629 + L1-Ta germline . no 188 .
srip20710 chr12 28226413 28226413 - L1-Ta germline . no 188 .
srip20971 chr12 33325793 33325793 - L1-Ta germline . no 188 .
srip22253 chr12 43256986 43256986 - L1-Ta germline . no 188 .
srip23689 chr12 76589413 76589413 - L1-Ta germline . no 188 .
srip24024 chr12 79338037 79338037 - L1-Ta germline . no 188 SYT1
srip24640 chr12 84965148 84965148 + L1-Ta germline . no 188 .
srip24912 chr12 85506290 85506290 + L1-Ta germline . no 188 LRRIQ1
srip25127 chr12 95808527 95808527 - L1-Ta germline . no 188 .
srip25252 chr12 98669929 98669929 + L1-Ta germline . no 188 .
srip25372 chr12 103427706 103427706 + L1-Ta germline . no 188 .
srip25637 chr12 117814447 117814447 - L1-Ta germline . no 188 .
srip26759 chr13 21817193 21817193 - L1-Ta germline . no 188 .
srip27009 chr13 22489805 22489805 + L1-Ta germline . no 188 .
srip27127 chr13 27423763 27423763 + L1-Ta somatic validated no 188 .
srip29043 chr13 61462336 61462336 - L1-Ta germline . no 188 .
srip30388 chr13 72968682 72968682 + L1-Ta germline . no 188 .
srip31015 chr13 79259793 79259793 - L1-Ta germline . no 188 .
srip32013 chr13 86340153 86340153 - L1-Ta germline . no 188 .
srip32394 chr13 91626223 91626223 + L1-Ta germline . no 188 .
srip33490 chr13 104296223 104296223 - L1-Ta germline . no 188 .
srip33647 chr13 104395943 104395943 - L1-Ta germline . no 188 .
srip33789 chr13 105280146 105280146 - L1-Ta germline . no 188 .
srip34281 chr14 19000969 19000969 + L1-Ta germline . no 188 .
srip35243 chr14 28301261 28301261 + L1-Ta germline . no 188 .
srip36026 chr14 36674760 36674760 + L1-Ta germline . no 188 .
srip36077 chr14 37769602 37769602 - L1-Ta germline . no 188 MIPOL1
srip37147 chr14 52667758 52667758 - L1-Ta germline . no 188 .
srip38152 chr14 71197799 71197799 + L1-Ta germline . no 188 MAP3K9
srip39027 chr15 22412531 22412531 - L1-Ta germline . no 188 .
srip39328 chr15 28175791 28175791 - L1-Ta germline . no 188 OCA2
srip39842 chr15 38339248 38339248 - L1-Ta germline . no 188 .
srip40209 chr15 47507329 47507329 - L1-Ta germline . no 188 SEMA6D
srip41243 chr15 56251153 56251153 + L1-Ta germline . no 188 NEDD4
srip41718 chr15 62169638 62169638 - L1-Ta germline . no 188 VPS13C
srip42973 chr15 98199968 98199968 + L1-Ta germline . no 188 .
srip43396 chr15 100931161 100931161 - L1-Ta germline . no 188 .
srip43444 chr16 3278459 3278459 + L1-Ta germline . no 188 ZNF200
srip44771 chr16 32523893 32523893 - L1-Ta germline . no 188 .
srip45052 chr16 32525611 32525611 - L1-Ta germline . no 188 .
srip45477 chr16 33992430 33992430 + L1-Ta germline . no 188 .
srip45524 chr16 34001600 34001600 + L1-Ta germline . no 188 .
srip45867 chr16 61079188 61079188 + L1-Ta germline . no 188 .
srip47354 chr17 28398313 28398313 + L1-Ta germline . no 188 EFCAB5
srip47584 chr17 32813605 32813605 + L1-Ta germline . no 188 .
srip48164 chr17 64637294 64637294 + L1-Ta germline . no 188 PRKCA
srip49436 chr18 28732902 28732902 - L1-Ta germline . no 188 DSC1
srip50002 chr18 49216219 49216219 - L1-Ta germline . no 188 .
srip52453 chr19 47024925 47024925 - L1-Ta germline . no 188 LOC100506012
srip52808 chr2 7050603 7050603 + L1-Ta germline . no 188 .
srip53430 chr2 23191000 23191000 - L1-Ta germline . no 188 .
srip53741 chr2 34321877 34321877 - L1-Ta germline . no 188 .
srip53948 chr2 35879359 35879359 + L1-Ta germline . no 188 .
srip54594 chr2 42051403 42051403 + L1-Ta germline . no 188 .
srip54916 chr2 53460052 53460052 + L1-Ta germline . no 188 .
srip56239 chr2 82098043 82098043 + L1-Ta germline . no 188 .
srip56900 chr2 106163164 106163164 + L1-Ta germline . no 188 .
srip57810 chr2 132868182 132868182 - L1-Ta germline . no 188 .
srip58208 chr2 141852908 141852908 - L1-Ta germline . no 188 LRP1B
srip59605 chr2 156527822 156527822 + L1-Ta germline . no 188 .
srip60130 chr2 178676245 178676245 - L1-Ta germline . no 188 PDE11A
srip61245 chr2 201638085 201638085 + L1-Ta germline . no 188 AOX2P
srip62354 chr2 230341559 230341559 + L1-Ta germline . no 188 DNER
srip62616 chr2 235519794 235519794 + L1-Ta germline . no 188 .
srip64794 chr20 41952105 41952105 - L1-Ta germline . no 188 .
srip65613 chr21 17134462 17134462 + L1-Ta germline . no 188 USP25
srip66028 chr21 19517313 19517313 - L1-Ta germline . no 188 .
srip67442 chr22 22486369 22486369 - L1-Ta germline . no 188 IGL@
srip68896 chr22 44324605 44324605 - L1-Ta germline . no 188 PNPLA3
srip69635 chr3 656435 656435 - L1-Ta germline . no 188 .
srip70066 chr3 17409573 17409573 - L1-Ta germline . no 188 TBC1D5
srip71158 chr3 26524464 26524464 - L1-Ta germline . no 188 .
srip71922 chr3 38626082 38626082 + L1-Ta germline . no 188 SCN5A
srip72741 chr3 55788580 55788580 + L1-Ta germline . no 188 ERC2
srip73409 chr3 59852903 59852903 + L1-Ta germline . no 188 FHIT
srip73777 chr3 75101216 75101216 + L1-Ta germline . no 188 .
srip74051 chr3 79216313 79216313 + L1-Ta germline . no 188 ROBO1
srip74707 chr3 81990993 81990993 - L1-Ta germline . no 188 .
srip75723 chr3 85868023 85868023 + L1-Ta germline . no 188 CADM2
srip75832 chr3 86264950 86264950 - L1-Ta germline . no 188 .
srip75899 chr3 89022346 89022346 - L1-Ta germline . no 188 .
srip76210 chr3 101279657 101279657 + L1-Ta germline . no 188 .
srip76435 chr3 105316337 105316337 + L1-Ta germline . no 188 .
srip76614 chr3 109751770 109751770 + L1-Ta germline . no 188 .
srip76695 chr3 111275065 111275065 + L1-Ta germline . no 188 CD96
srip76740 chr3 115448752 115448752 + L1-Ta germline . no 188 .
srip77275 chr3 123590726 123590726 + L1-Ta germline . no 188 MYLK
srip78145 chr3 143121759 143121759 - L1-Ta germline . no 188 SLC9A9
srip78274 chr3 144610072 144610072 - L1-Ta germline . no 188 .
srip78596 chr3 151148544 151148544 - L1-Ta germline . no 188 MED12L
srip79884 chr3 169269964 169269964 + L1-Ta germline . no 188 MECOM
srip80221 chr3 175677970 175677970 - L1-Ta germline . no 188 .
srip80392 chr3 176091333 176091333 + L1-Ta germline . no 188 .
srip80440 chr3 179794022 179794022 + L1-Ta germline . no 188 .
srip81642 chr3 187835309 187835309 - L1-Ta germline . no 188 .
srip82294 chr4 5667995 5667995 - L1-Ta germline . no 188 EVC2
srip82666 chr4 15872169 15872169 - L1-Ta germline . no 188 .
srip83117 chr4 18162689 18162689 - L1-Ta germline . no 188 .
srip83341 chr4 20246382 20246382 + L1-Ta germline . no 188 .
srip84882 chr4 47007790 47007790 - L1-Ta germline . no 188 .
srip85448 chr4 57497067 57497067 - L1-Ta germline . no 188 .
srip86195 chr4 66413932 66413932 + L1-Ta germline . no 188 EPHA5
srip86616 chr4 69572737 69572737 - L1-Ta germline . no 188 LOC728811
srip87219 chr4 80768518 80768518 + L1-Ta germline . no 188 GDEP
srip87350 chr4 80768541 80768541 + L1-Ta germline . no 188 GDEP
srip87821 chr4 85317459 85317459 - L1-Ta germline . no 188 .
srip87835 chr4 85317475 85317475 - L1-Ta germline . no 188 .
srip87910 chr4 86607956 86607956 + L1-Ta germline . no 188 ARHGAP24
srip88821 chr4 103343746 103343746 + L1-Ta germline . no 188 .
srip89021 chr4 104214686 104214686 + L1-Ta germline . no 188 .
srip89700 chr4 112242413 112242413 - L1-Ta germline . no 188 .
srip90395 chr4 116660152 116660152 - L1-Ta germline . no 188 .
srip90399 chr4 116660201 116660201 - L1-Ta germline . no 188 .
srip92218 chr4 134596423 134596423 + L1-Ta germline . no 188 .
srip92769 chr4 138177325 138177325 + L1-Ta germline . no 188 .
srip93107 chr4 147225296 147225296 + L1-Ta germline . no 188 SLC10A7
srip93745 chr4 157447970 157447970 + L1-Ta germline . no 188 .
srip94601 chr4 172560612 172560612 + L1-Ta germline . no 188 .
srip95472 chr5 1645773 1645773 + L1-Ta germline . no 188 .
srip96051 chr5 8749515 8749515 + L1-Ta germline . no 188 .
srip96908 chr5 21207732 21207732 + L1-Ta germline . no 188 .
srip97953 chr5 33633348 33633348 - L1-Ta germline . no 188 ADAMTS12
srip98601 chr5 46396964 46396964 + L1-Ta germline . no 188 .
srip99490 chr5 68263461 68263461 - L1-Ta germline . no 188 .
srip99762 chr5 83619783 83619783 - L1-Ta germline . no 188 EDIL3
srip100766 chr5 89450781 89450781 + L1-Ta germline . no 188 .
srip101063 chr5 96866407 96866407 + L1-Ta germline . no 188 .
srip102527 chr5 109567542 109567542 + L1-Ta germline . no 188 .
srip103373 chr5 125040045 125040045 + L1-Ta germline . no 188 .
srip103763 chr5 137014775 137014775 - L1-Ta germline . no 188 KLHL3
srip103978 chr5 142547048 142547048 + L1-Ta germline . no 188 ARHGAP26
srip105228 chr5 155619865 155619865 + L1-Ta germline . no 188 .
srip105574 chr5 159351199 159351199 - L1-Ta germline . no 188 ADRA1B
srip105784 chr5 162819864 162819864 + L1-Ta germline . no 188 .
srip107084 chr6 13191033 13191033 + L1-Ta germline . no 188 PHACTR1
srip107543 chr6 13503049 13503049 + L1-Ta germline . no 188 .
srip107740 chr6 19793129 19793129 + L1-Ta germline . no 188 .
srip108086 chr6 32613444 32613444 + L1-Ta germline . no 188 .
srip108101 chr6 32638838 32638838 - L1-Ta germline . no 188 .
srip108665 chr6 46310291 46310291 + L1-Ta germline . no 188 .
srip109546 chr6 63368207 63368207 + L1-Ta germline . no 188 .
srip109951 chr6 68112755 68112755 - L1-Ta germline . no 188 .
srip110110 chr6 69198745 69198745 - L1-Ta germline . no 188 .
srip111073 chr6 77980650 77980650 - L1-Ta germline . no 188 .
srip111206 chr6 78649689 78649689 - L1-Ta germline . no 188 .
srip113764 chr6 142450101 142450101 - L1-Ta germline . no 188 .
srip114443 chr6 148163587 148163587 + L1-Ta germline . no 188 .
srip114727 chr6 148195789 148195789 + L1-Ta germline . no 188 .
srip114875 chr6 154215663 154215663 + L1-Ta germline . no 188 .
srip115551 chr6 162181257 162181257 + L1-Ta germline . no 188 PARK2
srip116411 chr7 20170322 20170322 + L1-Ta germline . no 188 .
srip117006 chr7 42529864 42529864 - L1-Ta germline . no 188 .
srip117478 chr7 52789472 52789472 + L1-Ta germline . no 188 .
srip118185 chr7 62492930 62492930 + L1-Ta germline . no 188 .
srip119851 chr7 84901724 84901724 - L1-Ta germline . no 188 .
srip120223 chr7 85044737 85044737 + L1-Ta germline . no 188 .
srip120701 chr7 92857576 92857576 - L1-Ta germline . no 188 .
srip121785 chr7 107829263 107829263 + L1-Ta germline . no 188 NRCAM
srip124038 chr8 4452894 4452894 - L1-Ta germline . no 188 CSMD1
srip124552 chr8 5829283 5829283 - L1-Ta germline . no 188 .
srip125414 chr8 24926545 24926545 - L1-Ta germline . no 188 .
srip126914 chr8 67381885 67381885 - L1-Ta germline . no 188 .
srip127323 chr8 72399221 72399221 - L1-Ta germline . no 188 .
srip128234 chr8 87315040 87315040 + L1-Ta germline . no 188 .
srip128439 chr8 92186265 92186265 - L1-Ta germline . no 188 LRRC69
srip128767 chr8 107557032 107557032 - L1-Ta germline . no 188 OXR1
srip129155 chr8 115788580 115788580 - L1-Ta germline . no 188 .
srip129798 chr8 126537672 126537672 - L1-Ta germline . no 188 .
srip131131 chr9 6290494 6290494 + L1-Ta germline . no 188 .
srip131382 chr9 7741406 7741406 + L1-Ta germline . no 188 .
srip131387 chr9 8344961 8344961 + L1-Ta germline . no 188 PTPRD
srip133438 chr9 32463894 32463894 - L1-Ta germline . no 188 DDX58
srip133671 chr9 35883708 35883708 + L1-Ta germline . no 188 .
srip134681 chr9 100675534 100675534 - L1-Ta germline . no 188 C9orf156
srip135982 chr9 118083880 118083880 - L1-Ta germline . no 188 DEC1
srip136157 chr9 136105857 136105857 - L1-Ta germline . no 188 .
srip136321 chrX 11653118 11653118 + L1-Ta germline . no 188 ARHGAP6
srip138334 chrX 66982754 66982754 - L1-Ta germline . no 188 .
srip140299 chrX 111229559 111229559 - L1-Ta germline . no 188 TRPC5
srip140740 chrX 119892831 119892831 - L1-Ta germline . no 188 .
srip141473 chrX 130495439 130495439 - L1-Ta germline . no 188 .
srip141961 chrX 140515258 140515258 - L1-Ta germline . no 188 .
srip142171 chrX 154790189 154790189 + L1-Ta germline . no 188 TMLHE
srip142215 chrY 9951878 9951878 - L1-pre-Ta germline . no 188 .
srip142312 chrY 13653796 13653796 - L1-Ta germline . no 188 .