euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

200 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip91 chr1 17229479 17229479 - L1-Ta germline . no 187 .
srip1996 chr1 81855783 81855783 + L1-Ta germline . no 187 .
srip3325 chr1 106396428 106396428 - L1-Ta germline . no 187 .
srip4741 chr1 165553136 165553136 - L1-Ta germline . no 187 .
srip5030 chr1 169524859 169524859 + L1-Ta germline . no 187 F5
srip5408 chr1 179575362 179575362 - L1-Ta germline . no 187 TDRD5
srip5547 chr1 183969672 183969672 - L1-Ta germline . no 187 GLT25D2
srip5986 chr1 192262254 192262254 - L1-Ta germline . no 187 .
srip6009 chr1 192262268 192262268 - L1-Ta germline . no 187 .
srip6360 chr1 207579511 207579511 + L1-Ta germline . no 187 .
srip7402 chr1 242311577 242311577 + L1-Ta germline validated no 187 PLD5
srip7816 chr10 19065785 19065785 - L1-Ta germline . no 187 .
srip8176 chr10 23842058 23842058 - L1-Ta germline . no 187 .
srip8417 chr10 25707687 25707687 - L1-Ta germline . no 187 GPR158
srip8644 chr10 27775762 27775762 + L1-Ta germline . no 187 .
srip8813 chr10 42465627 42465627 + L1-Ta germline . no 187 .
srip9679 chr10 74767506 74767506 - L1-Ta germline . no 187 P4HA1
srip11852 chr10 124455231 124455231 + L1-Ta germline . no 187 .
srip11960 chr10 131468402 131468402 - L1-Ta germline . no 187 MGMT
srip12246 chr11 7285032 7285032 - L1-Ta germline . no 187 SYT9
srip12862 chr11 25123354 25123354 - L1-Ta germline . no 187 .
srip13059 chr11 26418541 26418541 + L1-Ta germline . no 187 ANO3
srip13786 chr11 33670123 33670123 + L1-Ta germline . no 187 C11orf41
srip13992 chr11 41096612 41096612 - L1-Ta germline . yes 187 .
srip14355 chr11 41831811 41831811 - L1-Ta germline . no 187 .
srip14558 chr11 43356955 43356955 + L1-Ta germline . no 187 API5
srip14753 chr11 48360753 48360753 - L1-Ta germline . no 187 .
srip15165 chr11 57985411 57985411 + L1-Ta germline . no 187 .
srip15349 chr11 58171838 58171838 + L1-Ta germline . no 187 .
srip15498 chr11 58570969 58570969 - L1-Ta germline . no 187 .
srip16800 chr11 88002109 88002109 - L1-Ta germline . no 187 .
srip18323 chr11 119327942 119327942 - L1-Ta germline . no 187 LOC100499227
srip18600 chr11 128367821 128367821 - L1-Ta germline . no 187 ETS1
srip19311 chr11 134305648 134305648 - L1-Ta germline . no 187 .
srip19660 chr12 8105629 8105629 + L1-Ta germline . no 187 .
srip20709 chr12 28226413 28226413 - L1-Ta germline . no 187 .
srip20870 chr12 31353751 31353751 - L1-pre-Ta germline . no 187 OVOS2
srip20970 chr12 33325793 33325793 - L1-Ta germline . no 187 .
srip22252 chr12 43256986 43256986 - L1-Ta germline . no 187 .
srip23688 chr12 76589413 76589413 - L1-Ta germline . no 187 .
srip24023 chr12 79338037 79338037 - L1-Ta germline . no 187 SYT1
srip24639 chr12 84965148 84965148 + L1-Ta germline . no 187 .
srip24911 chr12 85506290 85506290 + L1-Ta germline . no 187 LRRIQ1
srip25126 chr12 95808527 95808527 - L1-Ta germline . no 187 .
srip25251 chr12 98669929 98669929 + L1-Ta germline . no 187 .
srip25371 chr12 103427706 103427706 + L1-Ta germline . no 187 .
srip25636 chr12 117814447 117814447 - L1-Ta germline . no 187 .
srip26758 chr13 21817193 21817193 - L1-Ta germline . no 187 .
srip27008 chr13 22489805 22489805 + L1-Ta germline . no 187 .
srip29042 chr13 61462336 61462336 - L1-Ta germline . no 187 .
srip30387 chr13 72968682 72968682 + L1-Ta germline . no 187 .
srip31014 chr13 79259793 79259793 - L1-Ta germline . no 187 .
srip32012 chr13 86340153 86340153 - L1-Ta germline . no 187 .
srip32393 chr13 91626223 91626223 + L1-Ta germline . no 187 .
srip33489 chr13 104296223 104296223 - L1-Ta germline . no 187 .
srip33646 chr13 104395943 104395943 - L1-Ta germline . no 187 .
srip33788 chr13 105280146 105280146 - L1-Ta germline . no 187 .
srip34280 chr14 19000969 19000969 + L1-Ta germline . no 187 .
srip35242 chr14 28301261 28301261 + L1-Ta germline . no 187 .
srip36025 chr14 36674760 36674760 + L1-Ta germline . no 187 .
srip36076 chr14 37769602 37769602 - L1-Ta germline . no 187 MIPOL1
srip37146 chr14 52667758 52667758 - L1-Ta germline . no 187 .
srip38151 chr14 71197799 71197799 + L1-Ta germline . no 187 MAP3K9
srip39026 chr15 22412531 22412531 - L1-Ta germline . no 187 .
srip40208 chr15 47507329 47507329 - L1-Ta germline . no 187 SEMA6D
srip42240 chr15 73774017 73774017 - L1-Ta germline . no 187 C15orf60
srip42972 chr15 98199968 98199968 + L1-Ta germline . no 187 .
srip43395 chr15 100931161 100931161 - L1-Ta germline . no 187 .
srip43443 chr16 3278459 3278459 + L1-Ta germline . no 187 ZNF200
srip44770 chr16 32523893 32523893 - L1-Ta germline . no 187 .
srip45051 chr16 32525611 32525611 - L1-Ta germline . no 187 .
srip45866 chr16 61079188 61079188 + L1-Ta germline . no 187 .
srip47353 chr17 28398313 28398313 + L1-Ta germline . no 187 EFCAB5
srip47583 chr17 32813605 32813605 + L1-Ta germline . no 187 .
srip49435 chr18 28732902 28732902 - L1-Ta germline . no 187 DSC1
srip50001 chr18 49216219 49216219 - L1-Ta germline . no 187 .
srip52452 chr19 47024925 47024925 - L1-Ta germline . no 187 LOC100506012
srip52655 chr2 4479790 4479790 - L1-Ta somatic validated no 187 .
srip52807 chr2 7050603 7050603 + L1-Ta germline . no 187 .
srip53429 chr2 23191000 23191000 - L1-Ta germline . no 187 .
srip53740 chr2 34321877 34321877 - L1-Ta germline . no 187 .
srip53947 chr2 35879359 35879359 + L1-Ta germline . no 187 .
srip54593 chr2 42051403 42051403 + L1-Ta germline . no 187 .
srip54915 chr2 53460052 53460052 + L1-Ta germline . no 187 .
srip56238 chr2 82098043 82098043 + L1-Ta germline . no 187 .
srip56899 chr2 106163164 106163164 + L1-Ta germline . no 187 .
srip57432 chr2 119363768 119363768 + L1-Ta germline validated no 187 .
srip57809 chr2 132868182 132868182 - L1-Ta germline . no 187 .
srip58207 chr2 141852908 141852908 - L1-Ta germline . no 187 LRP1B
srip60129 chr2 178676245 178676245 - L1-Ta germline . no 187 PDE11A
srip61244 chr2 201638085 201638085 + L1-Ta germline . no 187 AOX2P
srip62353 chr2 230341559 230341559 + L1-Ta germline . no 187 DNER
srip62615 chr2 235519794 235519794 + L1-Ta germline . no 187 .
srip64006 chr20 25844027 25844027 + L1-Ta germline . no 187 .
srip64793 chr20 41952105 41952105 - L1-Ta germline . no 187 .
srip65612 chr21 17134462 17134462 + L1-Ta germline . no 187 USP25
srip66027 chr21 19517313 19517313 - L1-Ta germline . no 187 .
srip67441 chr22 22486369 22486369 - L1-Ta germline . no 187 IGL@
srip68895 chr22 44324605 44324605 - L1-Ta germline . no 187 PNPLA3
srip69813 chr3 3408044 3408044 + L1-Ta germline . no 187 .
srip70065 chr3 17409573 17409573 - L1-Ta germline . no 187 TBC1D5
srip71157 chr3 26524464 26524464 - L1-Ta germline . no 187 .
srip71921 chr3 38626082 38626082 + L1-Ta germline . no 187 SCN5A
srip72740 chr3 55788580 55788580 + L1-Ta germline . no 187 ERC2
srip73408 chr3 59852903 59852903 + L1-Ta germline . no 187 FHIT
srip73776 chr3 75101216 75101216 + L1-Ta germline . no 187 .
srip74050 chr3 79216313 79216313 + L1-Ta germline . no 187 ROBO1
srip74706 chr3 81990993 81990993 - L1-Ta germline . no 187 .
srip75722 chr3 85868023 85868023 + L1-Ta germline . no 187 CADM2
srip75831 chr3 86264950 86264950 - L1-Ta germline . no 187 .
srip75898 chr3 89022346 89022346 - L1-Ta germline . no 187 .
srip76209 chr3 101279657 101279657 + L1-Ta germline . no 187 .
srip76613 chr3 109751770 109751770 + L1-Ta germline . no 187 .
srip76694 chr3 111275065 111275065 + L1-Ta germline . no 187 CD96
srip76739 chr3 115448752 115448752 + L1-Ta germline . no 187 .
srip76812 chr3 119046413 119046413 + L1-Ta germline . no 187 ARHGAP31
srip77274 chr3 123590726 123590726 + L1-Ta germline . no 187 MYLK
srip78144 chr3 143121759 143121759 - L1-Ta germline . no 187 SLC9A9
srip78273 chr3 144610072 144610072 - L1-Ta germline . no 187 .
srip78595 chr3 151148544 151148544 - L1-Ta germline . no 187 MED12L
srip79883 chr3 169269964 169269964 + L1-Ta germline . no 187 MECOM
srip80220 chr3 175677970 175677970 - L1-Ta germline . no 187 .
srip80391 chr3 176091333 176091333 + L1-Ta germline . no 187 .
srip80439 chr3 179794022 179794022 + L1-Ta germline . no 187 .
srip81514 chr3 186372141 186372141 + L1-Ta germline . no 187 .
srip81641 chr3 187835309 187835309 - L1-Ta germline . no 187 .
srip82293 chr4 5667995 5667995 - L1-Ta germline . no 187 EVC2
srip82665 chr4 15872169 15872169 - L1-Ta germline . no 187 .
srip83340 chr4 20246382 20246382 + L1-Ta germline . no 187 .
srip84881 chr4 47007790 47007790 - L1-Ta germline . no 187 .
srip85447 chr4 57497067 57497067 - L1-Ta germline . no 187 .
srip85989 chr4 61330106 61330106 + L1-Ta germline . no 187 .
srip86194 chr4 66413932 66413932 + L1-Ta germline . no 187 EPHA5
srip86615 chr4 69572737 69572737 - L1-Ta germline . no 187 LOC728811
srip87909 chr4 86607956 86607956 + L1-Ta germline . no 187 ARHGAP24
srip89699 chr4 112242413 112242413 - L1-Ta germline . no 187 .
srip90394 chr4 116660152 116660152 - L1-Ta germline . no 187 .
srip92217 chr4 134596423 134596423 + L1-Ta germline . no 187 .
srip92768 chr4 138177325 138177325 + L1-Ta germline . no 187 .
srip93106 chr4 147225296 147225296 + L1-Ta germline . no 187 SLC10A7
srip93744 chr4 157447970 157447970 + L1-Ta germline . no 187 .
srip94600 chr4 172560612 172560612 + L1-Ta germline . no 187 .
srip95471 chr5 1645773 1645773 + L1-Ta germline . no 187 .
srip96050 chr5 8749515 8749515 + L1-Ta germline . no 187 .
srip96907 chr5 21207732 21207732 + L1-Ta germline . no 187 .
srip97952 chr5 33633348 33633348 - L1-Ta germline . no 187 ADAMTS12
srip98600 chr5 46396964 46396964 + L1-Ta germline . no 187 .
srip99489 chr5 68263461 68263461 - L1-Ta germline . no 187 .
srip100765 chr5 89450781 89450781 + L1-Ta germline . no 187 .
srip101062 chr5 96866407 96866407 + L1-Ta germline . no 187 .
srip102526 chr5 109567542 109567542 + L1-Ta germline . no 187 .
srip103372 chr5 125040045 125040045 + L1-Ta germline . no 187 .
srip103762 chr5 137014775 137014775 - L1-Ta germline . no 187 KLHL3
srip105227 chr5 155619865 155619865 + L1-Ta germline . no 187 .
srip105573 chr5 159351199 159351199 - L1-Ta germline . no 187 ADRA1B
srip105783 chr5 162819864 162819864 + L1-Ta germline . no 187 .
srip107083 chr6 13191033 13191033 + L1-Ta germline . no 187 PHACTR1
srip107542 chr6 13503049 13503049 + L1-Ta germline . no 187 .
srip107739 chr6 19793129 19793129 + L1-Ta germline . no 187 .
srip108085 chr6 32613444 32613444 + L1-Ta germline . no 187 .
srip108664 chr6 46310291 46310291 + L1-Ta germline . no 187 .
srip109183 chr6 61942547 61942547 - L1-Ta germline . no 187 .
srip109545 chr6 63368207 63368207 + L1-Ta germline . no 187 .
srip109950 chr6 68112755 68112755 - L1-Ta germline . no 187 .
srip110109 chr6 69198745 69198745 - L1-Ta germline . no 187 .
srip111205 chr6 78649689 78649689 - L1-Ta germline . no 187 .
srip113763 chr6 142450101 142450101 - L1-Ta germline . no 187 .
srip114442 chr6 148163587 148163587 + L1-Ta germline . no 187 .
srip114726 chr6 148195789 148195789 + L1-Ta germline . no 187 .
srip114874 chr6 154215663 154215663 + L1-Ta germline . no 187 .
srip115550 chr6 162181257 162181257 + L1-Ta germline . no 187 PARK2
srip116410 chr7 20170322 20170322 + L1-Ta germline . no 187 .
srip117005 chr7 42529864 42529864 - L1-Ta germline . no 187 .
srip117477 chr7 52789472 52789472 + L1-Ta germline . no 187 .
srip118184 chr7 62492930 62492930 + L1-Ta germline . no 187 .
srip119850 chr7 84901724 84901724 - L1-Ta germline . no 187 .
srip120222 chr7 85044737 85044737 + L1-Ta germline . no 187 .
srip120700 chr7 92857576 92857576 - L1-Ta germline . no 187 .
srip121784 chr7 107829263 107829263 + L1-Ta germline . no 187 NRCAM
srip124037 chr8 4452894 4452894 - L1-Ta germline . no 187 CSMD1
srip124551 chr8 5829283 5829283 - L1-Ta germline . no 187 .
srip125413 chr8 24926545 24926545 - L1-Ta germline . no 187 .
srip126913 chr8 67381885 67381885 - L1-Ta germline . no 187 .
srip127322 chr8 72399221 72399221 - L1-Ta germline . no 187 .
srip128233 chr8 87315040 87315040 + L1-Ta germline . no 187 .
srip128766 chr8 107557032 107557032 - L1-Ta germline . no 187 OXR1
srip129154 chr8 115788580 115788580 - L1-Ta germline . no 187 .
srip131130 chr9 6290494 6290494 + L1-Ta germline . no 187 .
srip131381 chr9 7741406 7741406 + L1-Ta germline . no 187 .
srip133437 chr9 32463894 32463894 - L1-Ta germline . no 187 DDX58
srip133670 chr9 35883708 35883708 + L1-Ta germline . no 187 .
srip134680 chr9 100675534 100675534 - L1-Ta germline . no 187 C9orf156
srip135981 chr9 118083880 118083880 - L1-Ta germline . no 187 DEC1
srip136320 chrX 11653118 11653118 + L1-Ta germline . no 187 ARHGAP6
srip140298 chrX 111229559 111229559 - L1-Ta germline . no 187 TRPC5
srip140739 chrX 119892831 119892831 - L1-Ta germline . no 187 .
srip141472 chrX 130495439 130495439 - L1-Ta germline . no 187 .
srip141960 chrX 140515258 140515258 - L1-Ta germline . no 187 .
srip142170 chrX 154790189 154790189 + L1-Ta germline . no 187 TMLHE
srip142214 chrY 9951878 9951878 - L1-pre-Ta germline . no 187 .