euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

239 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip564 chr1 43383333 43383333 + L1-Ta germline . no 181 .
srip566 chr1 43392450 43392450 + L1-Ta somatic validated no 181 SLC2A1
srip842 chr1 56405398 56405398 - L1-Ta germline . no 181 LOC100507652
srip1561 chr1 69801795 69801795 + L1-Ta germline . no 181 .
srip1990 chr1 81855783 81855783 + L1-Ta germline . no 181 .
srip2400 chr1 90914512 90914512 + L1-Ta germline validated no 181 .
srip3068 chr1 102568923 102568923 + L1-Ta germline . no 181 .
srip3297 chr1 105968014 105968014 - L1-Ta germline . no 181 .
srip3710 chr1 116980828 116980828 - L1-Ta germline . no 181 .
srip4029 chr1 149216797 149216797 + L1-Ta germline . no 181 .
srip4481 chr1 158696201 158696201 - L1-Ta germline . no 181 .
srip6005 chr1 192262268 192262268 - L1-Ta germline . no 181 .
srip6270 chr1 194934648 194934648 - L1-Ta germline validated no 181 .
srip6354 chr1 207579511 207579511 + L1-Ta germline . no 181 .
srip7450 chr1 248454039 248454039 - L1-pre-Ta germline . no 181 .
srip7729 chr10 16011786 16011786 - L1-Ta germline . no 181 .
srip7772 chr10 16031588 16031588 + L1-Ta germline . no 181 .
srip7791 chr10 17310909 17310909 + L1-Ta germline . no 181 .
srip8411 chr10 25707687 25707687 - L1-Ta germline . no 181 GPR158
srip8898 chr10 53063103 53063103 - L1-Ta germline . no 181 PRKG1
srip9475 chr10 68178133 68178133 + L1-Ta germline . no 181 CTNNA3
srip9673 chr10 74767506 74767506 - L1-Ta germline . no 181 P4HA1
srip10751 chr10 106314443 106314443 + L1-Ta germline . no 181 .
srip11198 chr10 110453470 110453470 + L1-Ta germline . no 181 .
srip11896 chr10 126983631 126983631 - L1-Ta germline . no 181 .
srip11908 chr10 126983646 126983646 - L1-Ta germline . no 181 .
srip12581 chr11 15507484 15507484 - L1-Ta germline . no 181 .
srip12982 chr11 26159992 26159992 - L1-Ta germline . no 181 .
srip13243 chr11 29874260 29874260 - L1-Ta germline . no 181 .
srip13780 chr11 33670123 33670123 + L1-Ta germline . no 181 C11orf41
srip13981 chr11 40841271 40841271 + L1-Ta germline . no 181 .
srip14349 chr11 41831811 41831811 - L1-Ta germline . no 181 .
srip14420 chr11 42376730 42376730 - L1-Ta germline . no 181 .
srip14747 chr11 48360753 48360753 - L1-Ta germline . no 181 .
srip15345 chr11 58171838 58171838 + L1-Ta germline . no 181 .
srip16152 chr11 72808550 72808550 + L1-Ta germline . no 181 FCHSD2
srip17757 chr11 104556130 104556130 - L1-Ta germline . no 181 .
srip18037 chr11 110377879 110377879 - L1-Ta germline . no 181 .
srip18321 chr11 119327942 119327942 - L1-Ta germline . no 181 LOC100499227
srip19305 chr11 134305648 134305648 - L1-Ta germline . no 181 .
srip20707 chr12 28226413 28226413 - L1-Ta germline . no 181 .
srip21737 chr12 38035076 38035076 + L1-Ta germline . no 181 .
srip22247 chr12 43256986 43256986 - L1-Ta germline . no 181 .
srip22488 chr12 44542592 44542592 + L1-Ta germline . no 181 TMEM117
srip22860 chr12 50063635 50063635 + L1-Ta germline . no 181 FMNL3
srip24021 chr12 79338037 79338037 - L1-Ta germline . no 181 SYT1
srip24418 chr12 84955216 84955216 - L1-Ta germline . no 181 .
srip24909 chr12 85506290 85506290 + L1-Ta germline . no 181 LRRIQ1
srip24981 chr12 87394040 87394040 + L1-pre-Ta germline . no 181 .
srip25038 chr12 92345987 92345987 + L1-Ta germline . no 181 .
srip25120 chr12 95808527 95808527 - L1-Ta germline . no 181 .
srip25632 chr12 117814447 117814447 - L1-Ta germline . no 181 .
srip25993 chr12 118186926 118186926 + L1-Ta germline . no 181 KSR2
srip26708 chr13 19620990 19620990 + L1-Ta germline . no 181 PHF2P1
srip27002 chr13 22489805 22489805 + L1-Ta germline . no 181 .
srip28435 chr13 58556528 58556528 + L1-Ta germline . no 181 .
srip29038 chr13 61462336 61462336 - L1-Ta germline . no 181 .
srip29222 chr13 61681801 61681801 - L1-Ta germline . no 181 .
srip31008 chr13 79259793 79259793 - L1-Ta germline . no 181 .
srip31416 chr13 85871602 85871602 - L1-Ta germline . no 181 .
srip32006 chr13 86340153 86340153 - L1-Ta germline . no 181 .
srip32747 chr13 96834839 96834839 + L1-Ta germline . no 181 HS6ST3
srip33483 chr13 104296223 104296223 - L1-Ta germline . no 181 .
srip33640 chr13 104395943 104395943 - L1-Ta germline . no 181 .
srip33782 chr13 105280146 105280146 - L1-Ta germline . no 181 .
srip34455 chr14 24992912 24992912 - L1-Ta germline . no 181 .
srip36019 chr14 36674760 36674760 + L1-Ta germline . no 181 .
srip36101 chr14 38325544 38325544 + L1-Ta germline . no 181 .
srip37140 chr14 52667758 52667758 - L1-Ta germline . no 181 .
srip37658 chr14 64907551 64907551 + L1-Ta germline . no 181 LOC100506245;MTHFD1
srip37679 chr14 67419043 67419043 + L1-Ta germline validated no 181 GPHN
srip37849 chr14 67419863 67419863 - L1-Ta germline . no 181 GPHN
srip37945 chr14 68784244 68784244 + L1-Ta germline . no 181 RAD51B
srip40732 chr15 51843819 51843819 + L1-Ta germline . no 181 DMXL2
srip40921 chr15 53956099 53956099 + L1-Ta germline . no 181 WDR72
srip41018 chr15 55129551 55129551 + L1-Ta germline . no 181 .
srip41336 chr15 58902199 58902199 + L1-Ta germline . no 181 ADAM10
srip42680 chr15 97226910 97226910 - L1-Ta germline . no 181 .
srip43044 chr15 98622504 98622504 + L1-Ta germline . no 181 .
srip43063 chr15 100432259 100432259 - L1-Ta germline . no 181 .
srip43389 chr15 100931161 100931161 - L1-Ta germline . no 181 .
srip43635 chr16 6793831 6793831 + L1-Ta germline . no 181 RBFOX1
srip44765 chr16 32523893 32523893 - L1-Ta germline . no 181 .
srip45045 chr16 32525611 32525611 - L1-Ta germline . no 181 .
srip45471 chr16 33992430 33992430 + L1-Ta germline . no 181 .
srip45860 chr16 61079188 61079188 + L1-Ta germline . no 181 .
srip46390 chr16 76865776 76865776 - L1-Ta germline . no 181 .
srip47347 chr17 28398313 28398313 + L1-Ta germline . no 181 EFCAB5
srip47888 chr17 34272148 34272148 + L1-Ta germline . no 181 .
srip49433 chr18 28732902 28732902 - L1-Ta germline . no 181 DSC1
srip49999 chr18 49216219 49216219 - L1-Ta germline . no 181 .
srip50709 chr18 51762730 51762730 - L1-Ta germline . no 181 .
srip51815 chr18 74960068 74960068 - L1-Ta germline . no 181 .
srip53425 chr2 23191000 23191000 - L1-Ta germline . no 181 .
srip53756 chr2 35760013 35760013 - L1-Ta germline . no 181 .
srip53944 chr2 35879359 35879359 + L1-Ta germline . no 181 .
srip54587 chr2 42051403 42051403 + L1-Ta germline . no 181 .
srip54667 chr2 43940575 43940575 + L1-Ta germline . no 181 PLEKHH2
srip54909 chr2 53460052 53460052 + L1-Ta germline . no 181 .
srip55222 chr2 68049223 68049223 - L1-Ta germline . no 181 .
srip56493 chr2 83188325 83188325 + L1-Ta germline . no 181 .
srip56665 chr2 92319790 92319790 - L1-Ta germline . no 181 .
srip57443 chr2 120295119 120295119 - L1-Ta germline . no 181 .
srip57657 chr2 129372166 129372166 + L1-Ta germline . no 181 .
srip58322 chr2 142785302 142785302 + L1-Ta germline . no 181 LRP1B
srip59492 chr2 154100589 154100589 - L1-Ta germline . no 181 .
srip60124 chr2 178676245 178676245 - L1-Ta germline . no 181 PDE11A
srip62351 chr2 230341559 230341559 + L1-Ta germline . no 181 DNER
srip62611 chr2 235519794 235519794 + L1-Ta germline . no 181 .
srip62734 chr20 1231070 1231070 - L1-Ta germline . no 181 RAD21L1
srip63699 chr20 20863919 20863919 + L1-Ta germline . no 181 .
srip66251 chr21 23626191 23626191 - L1-Ta germline . no 181 .
srip66857 chr21 29069171 29069171 + L1-Ta germline . no 181 .
srip67439 chr22 22486369 22486369 - L1-Ta germline . no 181 IGL@
srip67828 chr22 22715588 22715588 + L1-Ta germline . no 181 IGL@
srip69629 chr3 656435 656435 - L1-Ta germline . no 181 .
srip69775 chr3 2863232 2863232 + L1-Ta germline . no 181 CNTN4
srip69778 chr3 2883534 2883534 - L1-Ta germline . no 181 CNTN4
srip70059 chr3 17409573 17409573 - L1-Ta germline . no 181 TBC1D5
srip70445 chr3 20748896 20748896 - L1-Ta germline . no 181 .
srip71153 chr3 26524464 26524464 - L1-Ta germline . no 181 .
srip72153 chr3 48386752 48386752 + L1-Ta germline . no 181 .
srip73402 chr3 59852903 59852903 + L1-Ta germline . no 181 FHIT
srip73463 chr3 60604755 60604755 + L1-Ta germline validated no 181 FHIT
srip75672 chr3 85663354 85663354 - L1-Ta germline . no 181 CADM2
srip75896 chr3 89022346 89022346 - L1-Ta germline . no 181 .
srip76037 chr3 97329539 97329539 + L1-Ta germline . no 181 EPHA6
srip76356 chr3 102424072 102424072 - L1-Ta germline . no 181 .
srip78589 chr3 151148544 151148544 - L1-Ta germline . no 181 MED12L
srip79938 chr3 172749118 172749118 - L1-Ta germline . no 181 SPATA16
srip80385 chr3 176091333 176091333 + L1-Ta germline . no 181 .
srip81510 chr3 186372141 186372141 + L1-Ta germline . no 181 .
srip81635 chr3 187835309 187835309 - L1-Ta germline . no 181 .
srip82446 chr4 12429465 12429465 - L1-Ta germline . no 181 .
srip83334 chr4 20246382 20246382 + L1-Ta germline . no 181 .
srip83382 chr4 22240607 22240607 + L1-Ta germline . no 181 .
srip84051 chr4 37952113 37952113 - L1-Ta germline . no 181 TBC1D1
srip84875 chr4 47007790 47007790 - L1-Ta germline . no 181 .
srip86134 chr4 61999375 61999375 + L1-Ta germline . no 181 .
srip86609 chr4 69572737 69572737 - L1-Ta germline . no 181 LOC728811
srip87704 chr4 82921896 82921896 + L1-Ta germline . no 181 .
srip87817 chr4 85317459 85317459 - L1-Ta germline . no 181 .
srip87831 chr4 85317475 85317475 - L1-Ta germline . no 181 .
srip88140 chr4 98103803 98103803 - L1-Ta germline . no 181 .
srip88817 chr4 103343746 103343746 + L1-Ta germline . no 181 .
srip89986 chr4 112628973 112628973 + L1-Ta germline . no 181 .
srip90016 chr4 113909989 113909989 - L1-Ta germline . no 181 ANK2
srip90288 chr4 115132695 115132695 + L1-Ta germline . no 181 .
srip91122 chr4 126824141 126824141 + L1-Ta germline . no 181 .
srip91146 chr4 127275367 127275367 + L1-Ta germline . no 181 .
srip91227 chr4 128965442 128965442 - L1-Ta germline . no 181 .
srip92764 chr4 138177325 138177325 + L1-Ta germline . no 181 .
srip92865 chr4 138413561 138413561 - L1-Ta germline . no 181 .
srip93100 chr4 147225296 147225296 + L1-Ta germline . no 181 SLC10A7
srip93235 chr4 149395603 149395603 - L1-Ta germline . no 181 .
srip93716 chr4 154595629 154595629 - L1-Ta germline . no 181 .
srip94035 chr4 165231730 165231730 - L1-Ta germline . no 181 MARCH1
srip94964 chr4 178471522 178471522 - L1-Ta germline . no 181 .
srip95070 chr4 182418058 182418058 - L1-Ta germline . no 181 .
srip95365 chr4 190659695 190659695 + L1-Ta germline . no 181 .
srip95467 chr5 1645773 1645773 + L1-Ta germline . no 181 .
srip95708 chr5 7124391 7124391 + L1-Ta germline . no 181 .
srip96046 chr5 8749515 8749515 + L1-Ta germline . no 181 .
srip96355 chr5 11391276 11391276 + L1-Ta germline . no 181 CTNND2
srip96787 chr5 16883042 16883042 - L1-Ta germline . no 181 MYO10
srip96905 chr5 21207732 21207732 + L1-Ta germline . no 181 .
srip97218 chr5 26093140 26093140 + L1-Ta germline . no 181 .
srip97946 chr5 33633348 33633348 - L1-Ta germline . no 181 ADAMTS12
srip98029 chr5 33797544 33797544 - L1-Ta germline . no 181 ADAMTS12
srip98289 chr5 40041336 40041336 - L1-Ta germline . no 181 .
srip98354 chr5 41602028 41602028 + L1-Ta germline . no 181 .
srip98594 chr5 46396964 46396964 + L1-Ta germline . no 181 .
srip100074 chr5 84239673 84239673 - L1-Ta germline . no 181 .
srip100759 chr5 89450781 89450781 + L1-Ta germline . no 181 .
srip101058 chr5 96866407 96866407 + L1-Ta germline . no 181 .
srip102245 chr5 109480258 109480258 - L1-Ta germline . no 181 .
srip102520 chr5 109567542 109567542 + L1-Ta germline . no 181 .
srip102751 chr5 113568828 113568828 - L1-Ta germline . no 181 .
srip102760 chr5 114516456 114516456 - L1-Ta germline . no 181 .
srip103422 chr5 132033448 132033448 + L1-Ta germline . no 181 KIF3A
srip104224 chr5 144331013 144331013 - L1-Ta germline . no 181 .
srip105223 chr5 155619865 155619865 + L1-Ta germline . no 181 .
srip105278 chr5 155898951 155898951 - L1-Ta germline . no 181 SGCD
srip107753 chr6 22670019 22670019 - L1-pre-Ta germline . no 181 .
srip107794 chr6 27956045 27956045 + L1-Ta germline . no 181 .
srip108083 chr6 32613444 32613444 + L1-Ta germline . no 181 .
srip108134 chr6 34886957 34886957 + L1-Ta germline . no 181 ANKS1A
srip108265 chr6 45852697 45852697 - L1-Ta germline . no 181 .
srip108662 chr6 46310291 46310291 + L1-Ta germline . no 181 .
srip108951 chr6 56729315 56729315 - L1-Ta germline . no 181 LOC100652827
srip108976 chr6 57309681 57309681 - L1-pre-Ta germline . no 181 PRIM2
srip109176 chr6 61902641 61902641 + L1-Ta germline . no 181 .
srip109944 chr6 68112755 68112755 - L1-Ta germline . no 181 .
srip110107 chr6 69198745 69198745 - L1-Ta germline . no 181 .
srip110517 chr6 74935590 74935590 - L1-Ta germline . no 181 .
srip111282 chr6 78889134 78889134 + L1-Ta germline . no 181 .
srip112285 chr6 91767655 91767655 + L1-Ta germline . no 181 .
srip113009 chr6 114091140 114091140 + L1-Ta germline . no 181 LOC100652953
srip113538 chr6 133484980 133484980 - L1-Ta germline . no 181 .
srip113760 chr6 142450101 142450101 - L1-Ta germline . no 181 .
srip114868 chr6 154215663 154215663 + L1-Ta germline . no 181 .
srip115065 chr6 157968737 157968737 - L1-Ta germline . no 181 ZDHHC14
srip117075 chr7 45485689 45485689 + L1-Ta germline . no 181 .
srip117955 chr7 61778308 61778308 - L1-Ta germline . no 181 .
srip118178 chr7 62492930 62492930 + L1-Ta germline . no 181 .
srip120218 chr7 85044737 85044737 + L1-Ta germline . no 181 .
srip120755 chr7 93146611 93146611 - L1-Ta germline . no 181 CALCR
srip120930 chr7 95000591 95000591 - L1-Ta germline . no 181 PON3
srip121138 chr7 105967895 105967895 + L1-Ta germline . no 181 .
srip121778 chr7 107829263 107829263 + L1-Ta germline . no 181 NRCAM
srip122243 chr7 110484749 110484749 + L1-Ta germline . no 181 IMMP2L
srip122968 chr7 127930866 127930866 - L1-Ta germline . no 181 .
srip124545 chr8 5829283 5829283 - L1-Ta germline . no 181 .
srip125590 chr8 25323104 25323104 - L1-Ta germline . no 181 CDCA2
srip126400 chr8 58347940 58347940 + L1-Ta germline . no 181 .
srip126907 chr8 67381885 67381885 - L1-Ta germline . no 181 .
srip128009 chr8 83740679 83740679 + L1-Ta germline . no 181 .
srip128091 chr8 84682865 84682865 + L1-Ta germline . no 181 .
srip128760 chr8 107557032 107557032 - L1-Ta germline . no 181 OXR1
srip129150 chr8 115788580 115788580 - L1-Ta germline . no 181 .
srip129483 chr8 115881781 115881781 + L1-Ta germline . no 181 .
srip130724 chr9 5491418 5491418 + L1-Ta germline . no 181 .
srip132618 chr9 30674468 30674468 - L1-Ta germline . no 181 .
srip133431 chr9 32463894 32463894 - L1-Ta germline . no 181 DDX58
srip133664 chr9 35883708 35883708 + L1-Ta germline . no 181 .
srip134676 chr9 100675534 100675534 - L1-Ta germline . no 181 C9orf156
srip136032 chr9 121394590 121394590 - L1-Ta germline . no 181 .
srip136284 chrX 4659603 4659603 - L1-Ta germline . no 181 .
srip136314 chrX 11628376 11628376 - L1-Ta germline . no 181 ARHGAP6
srip137081 chrX 53798489 53798489 - L1-Ta germline . no 181 LOC100128454
srip137643 chrX 57806448 57806448 - L1-Ta germline . no 181 .
srip139786 chrX 98264302 98264302 - L1-Ta germline . no 181 .
srip140445 chrX 111557750 111557750 - L1-Ta germline . no 181 ZCCHC16
srip140737 chrX 119892831 119892831 - L1-Ta germline . no 181 .
srip141095 chrX 123230117 123230117 - L1-Ta germline . no 181 STAG2
srip141125 chrX 123612276 123612276 - L1-Ta germline . no 181 ODZ1
srip141152 chrX 123921246 123921246 - L1-Ta germline . no 181 ODZ1
srip141470 chrX 130495439 130495439 - L1-Ta germline . no 181 .
srip141958 chrX 140515258 140515258 - L1-Ta germline . no 181 .