euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

244 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip317 chr1 35992801 35992801 - L1-Ta germline . no 174 KIAA0319L
srip1560 chr1 69801795 69801795 + L1-Ta germline . no 174 .
srip1972 chr1 79110097 79110097 + L1-Ta germline . no 174 IFI44L
srip1983 chr1 81855783 81855783 + L1-Ta germline . no 174 .
srip3131 chr1 104646045 104646045 + L1-Ta germline . no 174 .
srip4025 chr1 149216797 149216797 + L1-Ta germline . no 174 .
srip4736 chr1 165553136 165553136 - L1-Ta germline . no 174 .
srip5403 chr1 179575362 179575362 - L1-Ta germline . no 174 TDRD5
srip5538 chr1 183969672 183969672 - L1-Ta germline . no 174 GLT25D2
srip5982 chr1 192262254 192262254 - L1-Ta germline . no 174 .
srip6004 chr1 192262268 192262268 - L1-Ta germline . no 174 .
srip6325 chr1 201918258 201918258 + L1-Ta germline . no 174 .
srip6347 chr1 207579511 207579511 + L1-Ta germline . no 174 .
srip6923 chr1 221827821 221827821 - L1-Ta germline . no 174 .
srip7446 chr1 248454039 248454039 - L1-pre-Ta germline . no 174 .
srip7728 chr10 16011786 16011786 - L1-Ta germline . no 174 .
srip7999 chr10 19216652 19216652 + L1-Ta germline . no 174 .
srip8404 chr10 25707687 25707687 - L1-Ta germline . no 174 GPR158
srip8811 chr10 42465627 42465627 + L1-Ta germline . no 174 .
srip9037 chr10 61148598 61148598 + L1-Ta germline . no 174 .
srip9473 chr10 68178133 68178133 + L1-Ta germline . no 174 CTNNA3
srip9666 chr10 74767506 74767506 - L1-Ta germline . no 174 P4HA1
srip10750 chr10 106314443 106314443 + L1-Ta germline . no 174 .
srip12860 chr11 25123354 25123354 - L1-Ta germline . no 174 .
srip13267 chr11 30180463 30180463 + L1-Ta germline . no 174 .
srip13980 chr11 40841271 40841271 + L1-Ta germline . no 174 .
srip14740 chr11 48360753 48360753 - L1-Ta germline . no 174 .
srip15342 chr11 58171838 58171838 + L1-Ta germline . no 174 .
srip16789 chr11 87404009 87404009 - L1-Ta germline . no 174 .
srip17750 chr11 104556130 104556130 - L1-Ta germline . no 174 .
srip18032 chr11 110377879 110377879 - L1-Ta germline . no 174 .
srip18645 chr11 132398113 132398113 - L1-Ta germline . no 174 OPCML
srip19298 chr11 134305648 134305648 - L1-Ta germline . no 174 .
srip19655 chr12 8105629 8105629 + L1-Ta germline . no 174 .
srip20457 chr12 25775841 25775841 - L1-Ta germline . no 174 IFLTD1
srip20702 chr12 28226413 28226413 - L1-Ta germline . no 174 .
srip21112 chr12 33790037 33790037 + L1-Ta germline . no 174 .
srip21151 chr12 34017325 34017325 - L1-Ta germline . no 174 .
srip21910 chr12 42215623 42215623 - L1-Ta germline . no 174 .
srip22242 chr12 43256986 43256986 - L1-Ta germline . no 174 .
srip22410 chr12 43390135 43390135 - L1-Ta germline . no 174 .
srip24415 chr12 84955216 84955216 - L1-Ta germline . no 174 .
srip25113 chr12 95808527 95808527 - L1-Ta germline . no 174 .
srip25988 chr12 118186926 118186926 + L1-Ta germline . no 174 KSR2
srip26350 chr12 126802929 126802929 - L1-Ta germline . no 174 .
srip26755 chr13 21817193 21817193 - L1-Ta germline . no 174 .
srip28160 chr13 48856541 48856541 + L1-Ta germline . no 174 .
srip30219 chr13 70521044 70521044 - L1-Ta germline . no 174 KLHL1
srip31001 chr13 79259793 79259793 - L1-Ta germline . no 174 .
srip31409 chr13 85871602 85871602 - L1-Ta germline . no 174 .
srip32298 chr13 91149409 91149409 - L1-Ta germline . no 174 .
srip32744 chr13 96331421 96331421 - L1-Ta germline . no 174 DNAJC3
srip33476 chr13 104296223 104296223 - L1-Ta germline . no 174 .
srip33633 chr13 104395943 104395943 - L1-Ta germline . no 174 .
srip33775 chr13 105280146 105280146 - L1-Ta germline . no 174 .
srip34271 chr14 19000969 19000969 + L1-Ta germline . no 174 .
srip34588 chr14 26787480 26787480 - L1-Ta germline . no 174 .
srip35234 chr14 28301261 28301261 + L1-Ta germline . no 174 .
srip36014 chr14 36674760 36674760 + L1-Ta germline . no 174 .
srip36067 chr14 37769602 37769602 - L1-Ta germline . no 174 MIPOL1
srip36100 chr14 38325544 38325544 + L1-Ta germline . no 174 .
srip36773 chr14 44410058 44410058 + L1-Ta germline . no 174 .
srip37133 chr14 52667758 52667758 - L1-Ta germline . no 174 .
srip37601 chr14 60669254 60669254 - L1-Ta germline . no 174 .
srip37842 chr14 67419863 67419863 - L1-Ta germline . no 174 GPHN
srip38858 chr14 94642967 94642967 + L1-Ta germline . no 174 PPP4R4
srip39025 chr15 22412531 22412531 - L1-Ta germline . no 174 .
srip39614 chr15 35654131 35654131 - L1-Ta germline . no 174 .
srip39923 chr15 46304802 46304802 + L1-Ta germline . no 174 .
srip40199 chr15 47507329 47507329 - L1-Ta germline . no 174 SEMA6D
srip40705 chr15 51459072 51459072 - L1-Ta germline . no 174 .
srip41513 chr15 60117708 60117708 + L1-Ta germline . no 174 .
srip41639 chr15 61328974 61328974 - L1-Ta germline . no 174 RORA
srip42239 chr15 73774017 73774017 - L1-Ta germline . no 174 C15orf60
srip43043 chr15 98622504 98622504 + L1-Ta germline . no 174 .
srip43437 chr16 871900 871900 - L1-Ta germline . no 174 .
srip45038 chr16 32525611 32525611 - L1-Ta germline . no 174 .
srip45464 chr16 33992430 33992430 + L1-Ta germline . no 174 .
srip45853 chr16 61079188 61079188 + L1-Ta germline . no 174 .
srip46830 chr17 15694331 15694331 - L1-pre-Ta germline . no 174 IL6STP1
srip47580 chr17 32813605 32813605 + L1-Ta germline . no 174 .
srip48886 chr18 12491262 12491262 + L1-Ta germline . no 174 SPIRE1
srip49428 chr18 28732902 28732902 - L1-Ta germline . no 174 DSC1
srip50885 chr18 58255673 58255673 + L1-Ta germline . no 174 .
srip51812 chr18 74960068 74960068 - L1-Ta germline . no 174 .
srip53420 chr2 23191000 23191000 - L1-Ta germline . no 174 .
srip54583 chr2 42051403 42051403 + L1-Ta germline . no 174 .
srip54760 chr2 49386669 49386669 - L1-Ta germline validated no 174 .
srip54906 chr2 53460052 53460052 + L1-Ta germline . no 174 .
srip55221 chr2 68049223 68049223 - L1-Ta germline . no 174 .
srip56535 chr2 83857354 83857354 - L1-Ta germline . no 174 .
srip56664 chr2 92319790 92319790 - L1-Ta germline . no 174 .
srip57442 chr2 120295119 120295119 - L1-Ta germline . no 174 .
srip57638 chr2 127013891 127013891 - L1-Ta germline . no 174 .
srip57654 chr2 129372166 129372166 + L1-Ta germline . no 174 .
srip57799 chr2 132868182 132868182 - L1-Ta germline . no 174 .
srip58571 chr2 144010793 144010793 + L1-Ta germline . no 174 ARHGAP15
srip59276 chr2 151744047 151744047 + L1-Ta germline . no 174 .
srip59666 chr2 163396813 163396813 - L1-Ta germline . no 174 KCNH7
srip60121 chr2 178676245 178676245 - L1-Ta germline . no 174 PDE11A
srip60482 chr2 181000540 181000540 + L1-Ta germline . no 174 .
srip61043 chr2 199454701 199454701 + L1-Ta germline . no 174 .
srip61680 chr2 213114174 213114174 + L1-Ta germline . no 174 ERBB4
srip62165 chr2 221503768 221503768 - L1-Ta germline . no 174 .
srip62210 chr2 226439403 226439403 - L1-Ta germline . no 174 KIAA1486
srip62350 chr2 230341559 230341559 + L1-Ta germline . no 174 DNER
srip62606 chr2 235519794 235519794 + L1-Ta germline . no 174 .
srip63188 chr20 9477925 9477925 - L1-Ta germline . no 174 .
srip63640 chr20 17860937 17860937 + L1-Ta germline . no 174 .
srip63934 chr20 22702082 22702082 - L1-Ta germline . no 174 .
srip65609 chr21 17134462 17134462 + L1-Ta germline . no 174 USP25
srip66020 chr21 19517313 19517313 - L1-Ta germline . no 174 .
srip66247 chr21 23626191 23626191 - L1-Ta germline . no 174 .
srip66946 chr21 29350123 29350123 + L1-Ta germline . no 174 .
srip67436 chr22 22486369 22486369 - L1-Ta germline . no 174 IGL@
srip67823 chr22 22715588 22715588 + L1-Ta germline . no 174 IGL@
srip70052 chr3 17409573 17409573 - L1-Ta germline . no 174 TBC1D5
srip70440 chr3 20748896 20748896 - L1-Ta germline . no 174 .
srip70614 chr3 21800882 21800882 + L1-Ta germline . no 174 .
srip70813 chr3 25278891 25278891 - L1-Ta germline . no 174 .
srip72733 chr3 55788580 55788580 + L1-Ta germline . no 174 ERC2
srip73397 chr3 59852903 59852903 + L1-Ta germline . no 174 FHIT
srip73772 chr3 75101216 75101216 + L1-Ta germline . no 174 .
srip74049 chr3 79216313 79216313 + L1-Ta germline . no 174 ROBO1
srip74840 chr3 82144854 82144854 - L1-Ta germline . no 174 .
srip75322 chr3 84593288 84593288 - L1-Ta germline . no 174 .
srip75599 chr3 85576568 85576568 + L1-Ta germline . no 174 CADM2
srip75826 chr3 86264950 86264950 - L1-Ta germline . no 174 .
srip75892 chr3 89022346 89022346 - L1-Ta germline . no 174 .
srip76096 chr3 98775485 98775485 - L1-Ta germline . no 174 .
srip76427 chr3 105316337 105316337 + L1-Ta germline . no 174 .
srip76608 chr3 109751770 109751770 + L1-Ta germline . no 174 .
srip76690 chr3 111275065 111275065 + L1-Ta germline . no 174 CD96
srip76738 chr3 115448752 115448752 + L1-Ta germline . no 174 .
srip76800 chr3 119046413 119046413 + L1-Ta germline . no 174 ARHGAP31
srip76854 chr3 120417974 120417974 + L1-Ta germline . no 174 RABL3
srip77497 chr3 131069779 131069779 + L1-Ta germline . no 174 LOC339874
srip77892 chr3 139044441 139044441 + L1-Ta germline . no 174 .
srip78304 chr3 145663473 145663473 + L1-Ta germline . no 174 .
srip78582 chr3 151148544 151148544 - L1-Ta germline . no 174 MED12L
srip79465 chr3 166092231 166092231 + L1-Ta germline . no 174 .
srip79678 chr3 168979548 168979548 + L1-Ta germline . no 174 MECOM
srip79935 chr3 172749118 172749118 - L1-Ta germline . no 174 SPATA16
srip80378 chr3 176091333 176091333 + L1-Ta germline . no 174 .
srip81505 chr3 186372141 186372141 + L1-Ta germline . no 174 .
srip81628 chr3 187835309 187835309 - L1-Ta germline . no 174 .
srip82292 chr4 5667995 5667995 - L1-Ta germline . no 174 EVC2
srip82455 chr4 13595811 13595811 + L1-Ta germline . no 174 BOD1L
srip82588 chr4 14849038 14849038 + L1-Ta germline . no 174 .
srip83327 chr4 20246382 20246382 + L1-Ta germline . no 174 .
srip83834 chr4 29321851 29321851 + L1-Ta germline . no 174 .
srip84072 chr4 40966470 40966470 + L1-Ta germline . no 174 APBB2
srip85444 chr4 57497067 57497067 - L1-Ta germline . no 174 .
srip85986 chr4 61330106 61330106 + L1-Ta germline . no 174 .
srip86131 chr4 61999375 61999375 + L1-Ta germline . no 174 .
srip86186 chr4 66413932 66413932 + L1-Ta germline . no 174 EPHA5
srip86415 chr4 67736072 67736072 - L1-Ta germline . no 174 .
srip87216 chr4 80768518 80768518 + L1-Ta germline . no 174 GDEP
srip87347 chr4 80768541 80768541 + L1-Ta germline . no 174 GDEP
srip88812 chr4 103343746 103343746 + L1-Ta germline . no 174 .
srip89586 chr4 110248316 110248316 - L1-Ta germline . no 174 .
srip89659 chr4 110248332 110248332 - L1-Ta germline . no 174 .
srip89981 chr4 112628973 112628973 + L1-Ta germline . no 174 .
srip90283 chr4 115132695 115132695 + L1-Ta germline . no 174 .
srip92210 chr4 134596423 134596423 + L1-Ta germline . no 174 .
srip93094 chr4 147225296 147225296 + L1-Ta germline . no 174 SLC10A7
srip94604 chr4 172786298 172786298 + L1-Ta germline . no 174 GALNTL6
srip94963 chr4 178471522 178471522 - L1-Ta germline . no 174 .
srip95067 chr4 182418058 182418058 - L1-Ta germline . no 174 .
srip96900 chr5 21207732 21207732 + L1-Ta germline . no 174 .
srip97939 chr5 33633348 33633348 - L1-Ta germline . no 174 ADAMTS12
srip98306 chr5 41428535 41428535 + L1-Ta germline . no 174 PLCXD3
srip98588 chr5 46396964 46396964 + L1-Ta germline . no 174 .
srip98866 chr5 51922573 51922573 - L1-Ta germline . no 174 .
srip99104 chr5 57279517 57279517 + L1-Ta germline . no 174 .
srip99712 chr5 79108566 79108566 - L1-Ta germline . no 174 .
srip100069 chr5 84239673 84239673 - L1-Ta germline . no 174 .
srip100752 chr5 89450781 89450781 + L1-Ta germline . no 174 .
srip101053 chr5 96866407 96866407 + L1-Ta germline . no 174 .
srip101474 chr5 100071612 100071612 + L1-Ta germline . no 174 .
srip101965 chr5 108929135 108929135 - L1-Ta germline . no 174 .
srip102515 chr5 109567542 109567542 + L1-Ta germline . no 174 .
srip103367 chr5 125040045 125040045 + L1-Ta germline . no 174 .
srip103537 chr5 132934086 132934086 + L1-Ta germline . no 174 FSTL4
srip105218 chr5 155619865 155619865 + L1-Ta germline . no 174 .
srip105778 chr5 162819864 162819864 + L1-Ta germline . no 174 .
srip107533 chr6 13503049 13503049 + L1-Ta germline . no 174 .
srip107610 chr6 16950834 16950834 - L1-Ta germline . no 174 .
srip107623 chr6 16950957 16950957 - L1-Ta germline . no 174 .
srip107752 chr6 22670019 22670019 - L1-pre-Ta germline . no 174 .
srip108080 chr6 32613444 32613444 + L1-Ta germline . no 174 .
srip108260 chr6 45852697 45852697 - L1-Ta germline . no 174 .
srip109569 chr6 63415756 63415756 + L1-Ta germline . no 174 .
srip109937 chr6 68112755 68112755 - L1-Ta germline . no 174 .
srip110405 chr6 74649915 74649915 - L1-Ta germline . no 174 .
srip110666 chr6 77379922 77379922 - L1-Ta germline . no 174 .
srip111200 chr6 78649689 78649689 - L1-Ta germline . no 174 .
srip112165 chr6 91669521 91669521 - L1-Ta germline . no 174 .
srip112280 chr6 91767655 91767655 + L1-Ta germline . no 174 .
srip113008 chr6 114091140 114091140 + L1-Ta germline . no 174 LOC100652953
srip114437 chr6 148163587 148163587 + L1-Ta germline . no 174 .
srip114861 chr6 154215663 154215663 + L1-Ta germline . no 174 .
srip115058 chr6 157968737 157968737 - L1-Ta germline . no 174 ZDHHC14
srip117000 chr7 42529864 42529864 - L1-Ta germline . no 174 .
srip117052 chr7 43227167 43227167 - L1-Ta germline . no 174 HECW1
srip117952 chr7 61778308 61778308 - L1-Ta germline . no 174 .
srip118175 chr7 62492930 62492930 + L1-Ta germline . no 174 .
srip119839 chr7 84901724 84901724 - L1-Ta germline . no 174 .
srip120754 chr7 93146611 93146611 - L1-Ta germline . no 174 CALCR
srip121137 chr7 105967895 105967895 + L1-Ta germline . no 174 .
srip121173 chr7 107410719 107410719 - L1-Ta germline . no 174 SLC26A3
srip121771 chr7 107829263 107829263 + L1-Ta germline . no 174 NRCAM
srip122236 chr7 110484749 110484749 + L1-Ta germline . no 174 IMMP2L
srip122592 chr7 119446561 119446561 - L1-Ta germline . no 174 .
srip123723 chr7 154508477 154508477 - L1-Ta germline . no 174 DPP6
srip124542 chr8 5829283 5829283 - L1-Ta germline . no 174 .
srip124859 chr8 13898766 13898766 + L1-Ta germline . no 174 .
srip125406 chr8 24926545 24926545 - L1-Ta germline . no 174 .
srip125773 chr8 40433176 40433176 - L1-Ta germline . no 174 ZMAT4
srip126397 chr8 58347940 58347940 + L1-Ta germline . no 174 .
srip126900 chr8 67381885 67381885 - L1-Ta germline . no 174 .
srip127571 chr8 75723722 75723722 + L1-Ta germline . no 174 .
srip128224 chr8 87315040 87315040 + L1-Ta germline . no 174 .
srip128840 chr8 111632621 111632621 + L1-Ta germline . no 174 .
srip129147 chr8 115788580 115788580 - L1-Ta germline . no 174 .
srip131119 chr9 6290494 6290494 + L1-Ta germline . no 174 .
srip131535 chr9 9236600 9236600 + L1-Ta germline . no 174 PTPRD
srip132398 chr9 30495887 30495887 - L1-Ta germline . no 174 .
srip132615 chr9 30674468 30674468 - L1-Ta germline . no 174 .
srip133426 chr9 32463894 32463894 - L1-Ta germline . no 174 DDX58
srip133657 chr9 35883708 35883708 + L1-Ta germline . no 174 .
srip133906 chr9 71190135 71190135 - L1-Ta germline . no 174 .
srip135034 chr9 105073654 105073654 + L1-Ta germline . no 174 .
srip136283 chrX 4659603 4659603 - L1-Ta germline . no 174 .
srip136313 chrX 11628376 11628376 - L1-Ta germline . no 174 ARHGAP6
srip137092 chrX 54717044 54717044 - L1-Ta germline . no 174 .
srip137642 chrX 57806448 57806448 - L1-Ta germline . no 174 .
srip140068 chrX 102363174 102363174 + L1-Ta germline . no 174 .
srip140187 chrX 106671572 106671572 - L1-Ta germline . no 174 .
srip140444 chrX 111557750 111557750 - L1-Ta germline . no 174 ZCCHC16
srip141105 chrX 123611800 123611800 + L1-Ta germline . no 174 ODZ1
srip141122 chrX 123612276 123612276 - L1-Ta germline . no 174 ODZ1
srip141464 chrX 130495439 130495439 - L1-Ta germline . no 174 .
srip142208 chrY 9951878 9951878 - L1-pre-Ta germline . no 174 .