euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

235 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip83 chr1 17229479 17229479 - L1-Ta germline . no 172 .
srip359 chr1 41502725 41502725 + L1-Ta germline . no 172 LOC100507178;SCMH1
srip835 chr1 56405398 56405398 - L1-Ta germline . no 172 LOC100507652
srip1981 chr1 81855783 81855783 + L1-Ta germline . no 172 .
srip3129 chr1 104646045 104646045 + L1-Ta germline . no 172 .
srip3283 chr1 105857777 105857777 - L1-Ta germline . no 172 .
srip4024 chr1 149216797 149216797 + L1-Ta germline . no 172 .
srip4487 chr1 158853726 158853726 + L1-Ta germline . no 172 .
srip4528 chr1 162015887 162015887 - L1-Ta germline . no 172 .
srip5023 chr1 169524859 169524859 + L1-Ta germline . no 172 F5
srip5536 chr1 183969672 183969672 - L1-Ta germline . no 172 GLT25D2
srip6345 chr1 207579511 207579511 + L1-Ta germline . no 172 .
srip7249 chr1 241262724 241262724 - L1-pre-Ta germline . no 172 RGS7
srip7770 chr10 16031588 16031588 + L1-Ta germline . no 172 .
srip7813 chr10 19065785 19065785 - L1-Ta germline . no 172 .
srip8402 chr10 25707687 25707687 - L1-Ta germline . no 172 GPR158
srip8810 chr10 42465627 42465627 + L1-Ta germline . no 172 .
srip8906 chr10 53192468 53192468 - L1-Ta germline . no 172 PRKG1
srip9665 chr10 74767506 74767506 - L1-Ta germline . no 172 P4HA1
srip11191 chr10 110453470 110453470 + L1-Ta germline . no 172 .
srip11847 chr10 124455231 124455231 + L1-Ta germline . no 172 .
srip11895 chr10 126983631 126983631 - L1-Ta germline . no 172 .
srip11907 chr10 126983646 126983646 - L1-Ta germline . no 172 .
srip12228 chr11 4415929 4415929 - L1-Ta germline . no 172 .
srip12264 chr11 7435902 7435902 - L1-Ta germline . no 172 SYT9
srip13265 chr11 30180463 30180463 + L1-Ta germline . no 172 .
srip13773 chr11 33670123 33670123 + L1-Ta germline . no 172 C11orf41
srip13945 chr11 39225160 39225160 - L1-Ta germline . no 172 .
srip13978 chr11 40841271 40841271 + L1-Ta germline . no 172 .
srip14738 chr11 48360753 48360753 - L1-Ta germline . no 172 .
srip19296 chr11 134305648 134305648 - L1-Ta germline . no 172 .
srip20366 chr12 24217996 24217996 + L1-Ta germline . no 172 SOX5
srip20700 chr12 28226413 28226413 - L1-Ta germline . no 172 .
srip22240 chr12 43256986 43256986 - L1-Ta germline . no 172 .
srip22487 chr12 44542592 44542592 + L1-Ta germline . no 172 TMEM117
srip24020 chr12 79338037 79338037 - L1-Ta germline . no 172 SYT1
srip24413 chr12 84955216 84955216 - L1-Ta germline . no 172 .
srip24906 chr12 85506290 85506290 + L1-Ta germline . no 172 LRRIQ1
srip25111 chr12 95808527 95808527 - L1-Ta germline . no 172 .
srip25386 chr12 107590482 107590482 - L1-Ta germline . no 172 .
srip25986 chr12 118186926 118186926 + L1-Ta germline . no 172 KSR2
srip26348 chr12 126802929 126802929 - L1-Ta germline . no 172 .
srip26740 chr13 21514956 21514956 - L1-Ta germline . no 172 .
srip26748 chr13 21514971 21514971 - L1-Ta germline . no 172 .
srip26754 chr13 21817193 21817193 - L1-Ta germline . no 172 .
srip27001 chr13 22489805 22489805 + L1-Ta germline . no 172 .
srip28432 chr13 58556528 58556528 + L1-Ta germline . no 172 .
srip29604 chr13 61734485 61734485 + L1-Ta germline . no 172 .
srip29857 chr13 65549225 65549225 - L1-Ta germline . no 172 .
srip30217 chr13 70521044 70521044 - L1-Ta germline . no 172 KLHL1
srip30384 chr13 72968682 72968682 + L1-Ta germline . no 172 .
srip30999 chr13 79259793 79259793 - L1-Ta germline . no 172 .
srip31193 chr13 83284212 83284212 + L1-Ta germline . no 172 .
srip31407 chr13 85871602 85871602 - L1-Ta germline . no 172 .
srip32296 chr13 91149409 91149409 - L1-Ta germline . no 172 .
srip33474 chr13 104296223 104296223 - L1-Ta germline . no 172 .
srip33631 chr13 104395943 104395943 - L1-Ta germline . no 172 .
srip33773 chr13 105280146 105280146 - L1-Ta germline . no 172 .
srip35232 chr14 28301261 28301261 + L1-Ta germline . no 172 .
srip36012 chr14 36674760 36674760 + L1-Ta germline . no 172 .
srip36066 chr14 37769602 37769602 - L1-Ta germline . no 172 MIPOL1
srip37131 chr14 52667758 52667758 - L1-Ta germline . no 172 .
srip37840 chr14 67419863 67419863 - L1-Ta germline . no 172 GPHN
srip38598 chr14 86381796 86381796 - L1-Ta germline . no 172 .
srip39024 chr15 22412531 22412531 - L1-Ta germline . no 172 .
srip40920 chr15 53956099 53956099 + L1-Ta germline . no 172 WDR72
srip41236 chr15 56251153 56251153 + L1-Ta germline . no 172 NEDD4
srip43041 chr15 98622504 98622504 + L1-Ta germline . no 172 .
srip45036 chr16 32525611 32525611 - L1-Ta germline . no 172 .
srip45463 chr16 33992430 33992430 + L1-Ta germline . no 172 .
srip45574 chr16 51803074 51803074 + L1-Ta germline . no 172 .
srip45851 chr16 61079188 61079188 + L1-Ta germline . no 172 .
srip47342 chr17 28398313 28398313 + L1-Ta germline . no 172 EFCAB5
srip47578 chr17 32813605 32813605 + L1-Ta germline . no 172 .
srip47883 chr17 34272148 34272148 + L1-Ta germline . no 172 .
srip49426 chr18 28732902 28732902 - L1-Ta germline . no 172 DSC1
srip49996 chr18 49216219 49216219 - L1-Ta germline . no 172 .
srip50337 chr18 51425726 51425726 - L1-Ta germline . no 172 .
srip50705 chr18 51762730 51762730 - L1-Ta germline . no 172 .
srip50839 chr18 55880937 55880937 - L1-Ta germline . no 172 NEDD4L
srip52416 chr19 44979614 44979614 + L1-Ta germline . no 172 .
srip52440 chr19 45444699 45444699 + L1-Ta germline . no 172 .
srip52762 chr2 6798288 6798288 - L1-Ta germline . no 172 .
srip53418 chr2 23191000 23191000 - L1-Ta germline . no 172 .
srip53719 chr2 29645155 29645155 - L1-Ta germline validated no 172 ALK
srip53939 chr2 35879359 35879359 + L1-Ta germline . no 172 .
srip54328 chr2 36619715 36619715 + L1-Ta germline . no 172 CRIM1
srip54403 chr2 41913652 41913652 - L1-Ta germline . no 172 .
srip54581 chr2 42051403 42051403 + L1-Ta germline . no 172 .
srip54904 chr2 53460052 53460052 + L1-Ta germline . no 172 .
srip56231 chr2 82098043 82098043 + L1-Ta germline . no 172 .
srip56490 chr2 83188325 83188325 + L1-Ta germline . no 172 .
srip56609 chr2 92291306 92291306 - L1-Ta germline . no 172 .
srip56663 chr2 92319790 92319790 - L1-Ta germline . no 172 .
srip56896 chr2 106163164 106163164 + L1-Ta germline . no 172 .
srip57652 chr2 129372166 129372166 + L1-Ta germline . no 172 .
srip57797 chr2 132868182 132868182 - L1-Ta germline . no 172 .
srip58200 chr2 141852908 141852908 - L1-Ta germline . no 172 LRP1B
srip58321 chr2 142785302 142785302 + L1-Ta germline . no 172 LRP1B
srip58669 chr2 144626235 144626235 + L1-pre-Ta germline . no 172 .
srip59266 chr2 150889037 150889037 - L1-Ta germline . no 172 .
srip59489 chr2 154100589 154100589 - L1-Ta germline . no 172 .
srip59891 chr2 174534152 174534152 + L1-Ta germline . no 172 .
srip59893 chr2 174534171 174534171 + L1-Ta germline . no 172 .
srip60119 chr2 178676245 178676245 - L1-Ta germline . no 172 PDE11A
srip62163 chr2 221503768 221503768 - L1-Ta germline . no 172 .
srip62462 chr2 232482740 232482740 + L1-Ta germline . no 172 .
srip62604 chr2 235519794 235519794 + L1-Ta germline . no 172 .
srip63928 chr20 22501649 22501649 + L1-Ta germline . no 172 .
srip65607 chr21 17134462 17134462 + L1-Ta germline . no 172 USP25
srip66245 chr21 23626191 23626191 - L1-Ta germline . no 172 .
srip66852 chr21 29069171 29069171 + L1-Ta germline . no 172 .
srip67821 chr22 22715588 22715588 + L1-Ta germline . no 172 IGL@
srip68894 chr22 44324605 44324605 - L1-Ta germline . no 172 PNPLA3
srip70002 chr3 6635238 6635238 - L1-Ta germline . no 172 .
srip70025 chr3 6752728 6752728 - L1-Ta germline . no 172 .
srip70050 chr3 17409573 17409573 - L1-Ta germline . no 172 TBC1D5
srip70612 chr3 21800882 21800882 + L1-Ta germline . no 172 .
srip73395 chr3 59852903 59852903 + L1-Ta germline . no 172 FHIT
srip73770 chr3 75101216 75101216 + L1-Ta germline . no 172 .
srip74421 chr3 80590163 80590163 - L1-Ta germline . no 172 .
srip74838 chr3 82144854 82144854 - L1-Ta germline . no 172 .
srip75088 chr3 84433395 84433395 + L1-Ta germline . no 172 .
srip75890 chr3 89022346 89022346 - L1-Ta germline . no 172 .
srip76425 chr3 105316337 105316337 + L1-Ta germline . no 172 .
srip76606 chr3 109751770 109751770 + L1-Ta germline . no 172 .
srip76799 chr3 119046413 119046413 + L1-Ta germline . no 172 ARHGAP31
srip78302 chr3 145663473 145663473 + L1-Ta germline . no 172 .
srip79312 chr3 162717306 162717306 + L1-Ta germline . no 172 .
srip79878 chr3 169269964 169269964 + L1-Ta germline . no 172 MECOM
srip79911 chr3 170999415 170999415 - L1-Ta germline . no 172 TNIK
srip80376 chr3 176091333 176091333 + L1-Ta germline . no 172 .
srip81503 chr3 186372141 186372141 + L1-Ta germline . no 172 .
srip81626 chr3 187835309 187835309 - L1-Ta germline . no 172 .
srip82130 chr3 193354175 193354175 - L1-Ta germline . no 172 OPA1
srip83256 chr4 18194357 18194357 - L1-Ta germline . no 172 .
srip83325 chr4 20246382 20246382 + L1-Ta germline . no 172 .
srip85442 chr4 57497067 57497067 - L1-Ta germline . no 172 .
srip85818 chr4 58917529 58917529 - L1-Ta germline . no 172 .
srip86184 chr4 66413932 66413932 + L1-Ta germline . no 172 EPHA5
srip86606 chr4 69572737 69572737 - L1-Ta germline . no 172 LOC728811
srip87755 chr4 85249967 85249967 + L1-Ta germline . no 172 .
srip89249 chr4 107095004 107095004 - L1-Ta germline . no 172 TBCK
srip89584 chr4 110248316 110248316 - L1-Ta germline . no 172 .
srip89657 chr4 110248332 110248332 - L1-Ta germline . no 172 .
srip89979 chr4 112628973 112628973 + L1-Ta germline . no 172 .
srip90393 chr4 116660152 116660152 - L1-Ta germline . no 172 .
srip90398 chr4 116660201 116660201 - L1-Ta germline . no 172 .
srip90699 chr4 118765255 118765255 + L1-Ta germline . no 172 .
srip92757 chr4 138177325 138177325 + L1-Ta germline . no 172 .
srip93092 chr4 147225296 147225296 + L1-Ta germline . no 172 SLC10A7
srip93743 chr4 157447970 157447970 + L1-Ta germline . no 172 .
srip94073 chr4 165395177 165395177 - L1-Ta germline . no 172 .
srip94407 chr4 169413099 169413099 - L1-Ta germline . no 172 .
srip94961 chr4 178471522 178471522 - L1-Ta germline . no 172 .
srip95065 chr4 182418058 182418058 - L1-Ta germline . no 172 .
srip96782 chr5 16883042 16883042 - L1-Ta germline . no 172 MYO10
srip97337 chr5 30975979 30975979 + L1-Ta germline . no 172 .
srip97937 chr5 33633348 33633348 - L1-Ta germline . no 172 ADAMTS12
srip98027 chr5 33797544 33797544 - L1-Ta germline . no 172 ADAMTS12
srip98286 chr5 40041336 40041336 - L1-Ta germline . no 172 .
srip98586 chr5 46396964 46396964 + L1-Ta germline . no 172 .
srip98864 chr5 51922573 51922573 - L1-Ta germline . no 172 .
srip99187 chr5 65438345 65438345 - L1-Ta germline . no 172 .
srip101051 chr5 96866407 96866407 + L1-Ta germline . no 172 .
srip102238 chr5 109480258 109480258 - L1-Ta germline . no 172 .
srip102513 chr5 109567542 109567542 + L1-Ta germline . no 172 .
srip102770 chr5 115449063 115449063 - L1-pre-Ta germline . no 172 COMMD10
srip103581 chr5 132977632 132977632 - L1-Ta germline . no 172 .
srip104005 chr5 143413889 143413889 + L1-Ta germline . no 172 .
srip104219 chr5 144331013 144331013 - L1-Ta germline . no 172 .
srip107073 chr6 13191033 13191033 + L1-Ta germline . no 172 PHACTR1
srip107531 chr6 13503049 13503049 + L1-Ta germline . no 172 .
srip107595 chr6 16417684 16417684 - L1-Ta germline . no 172 ATXN1
srip107621 chr6 16950957 16950957 - L1-Ta germline . no 172 .
srip108078 chr6 32613444 32613444 + L1-Ta germline . no 172 .
srip108098 chr6 32638838 32638838 - L1-Ta germline . no 172 .
srip108133 chr6 34886957 34886957 + L1-Ta germline . no 172 ANKS1A
srip108258 chr6 45852697 45852697 - L1-Ta germline . no 172 .
srip109567 chr6 63415756 63415756 + L1-Ta germline . no 172 .
srip109935 chr6 68112755 68112755 - L1-Ta germline . no 172 .
srip110664 chr6 77379922 77379922 - L1-Ta germline . no 172 .
srip111062 chr6 77980650 77980650 - L1-Ta germline . no 172 .
srip111198 chr6 78649689 78649689 - L1-Ta germline . no 172 .
srip111272 chr6 78749392 78749392 + L1-Ta germline . no 172 .
srip112163 chr6 91669521 91669521 - L1-Ta germline . no 172 .
srip112278 chr6 91767655 91767655 + L1-Ta germline . no 172 .
srip113006 chr6 114091140 114091140 + L1-Ta germline . no 172 LOC100652953
srip114859 chr6 154215663 154215663 + L1-Ta germline . no 172 .
srip115056 chr6 157968737 157968737 - L1-Ta germline . no 172 ZDHHC14
srip115545 chr6 162181257 162181257 + L1-Ta germline . no 172 PARK2
srip116428 chr7 21927847 21927847 + L1-Ta germline . no 172 DNAH11
srip117072 chr7 45485689 45485689 + L1-Ta germline . no 172 .
srip117469 chr7 52789472 52789472 + L1-Ta germline . no 172 .
srip117950 chr7 61778308 61778308 - L1-Ta germline . no 172 .
srip118173 chr7 62492930 62492930 + L1-Ta germline . no 172 .
srip119837 chr7 84901724 84901724 - L1-Ta germline . no 172 .
srip120215 chr7 85044737 85044737 + L1-Ta germline . no 172 .
srip120528 chr7 90331907 90331907 - L1-Ta germline . no 172 .
srip120929 chr7 95000591 95000591 - L1-Ta germline . no 172 PON3
srip121769 chr7 107829263 107829263 + L1-Ta germline . no 172 NRCAM
srip122234 chr7 110484749 110484749 + L1-Ta germline . no 172 IMMP2L
srip122295 chr7 111232935 111232935 - L1-Ta germline . no 172 .
srip122590 chr7 119446561 119446561 - L1-Ta germline . no 172 .
srip122700 chr7 126582159 126582159 + L1-Ta germline . no 172 GRM8
srip123340 chr7 142818667 142818667 + L1-Ta germline . no 172 .
srip123662 chr7 146795524 146795524 - L1-Ta germline . no 172 CNTNAP2
srip124540 chr8 5829283 5829283 - L1-Ta germline . no 172 .
srip124857 chr8 13898766 13898766 + L1-Ta germline . no 172 .
srip125404 chr8 24926545 24926545 - L1-Ta germline . no 172 .
srip126898 chr8 67381885 67381885 - L1-Ta germline . no 172 .
srip127313 chr8 72399221 72399221 - L1-Ta germline . no 172 .
srip128006 chr8 83740679 83740679 + L1-Ta germline . no 172 .
srip128222 chr8 87315040 87315040 + L1-Ta germline . no 172 .
srip129145 chr8 115788580 115788580 - L1-Ta germline . no 172 .
srip129482 chr8 115881781 115881781 + L1-Ta germline . no 172 .
srip130095 chr8 131041219 131041219 + L1-Ta germline . no 172 .
srip130564 chr9 4265400 4265400 + L1-Ta germline . no 172 GLIS3
srip130723 chr9 5491418 5491418 + L1-Ta germline . no 172 .
srip131659 chr9 10417326 10417326 + L1-Ta germline . no 172 PTPRD
srip133424 chr9 32463894 32463894 - L1-Ta germline . no 172 DDX58
srip133655 chr9 35883708 35883708 + L1-Ta germline . no 172 .
srip133825 chr9 68420861 68420861 - L1-Ta germline . no 172 .
srip133904 chr9 71190135 71190135 - L1-Ta germline . no 172 .
srip135972 chr9 118083880 118083880 - L1-Ta germline . no 172 DEC1
srip136029 chr9 121394590 121394590 - L1-Ta germline . no 172 .
srip136523 chrX 14152012 14152012 - L1-Ta germline . no 172 .
srip136767 chrX 24384651 24384651 - L1-Ta germline . no 172 .
srip136802 chrX 30077182 30077182 - L1-Ta germline . no 172 .
srip137080 chrX 53798489 53798489 - L1-Ta germline . no 172 LOC100128454
srip139418 chrX 85781782 85781782 + L1-Ta germline . no 172 DACH2
srip141103 chrX 123611800 123611800 + L1-Ta germline . no 172 ODZ1
srip141120 chrX 123612276 123612276 - L1-Ta germline . no 172 ODZ1
srip141462 chrX 130495439 130495439 - L1-Ta germline . no 172 .
srip142206 chrY 9951878 9951878 - L1-pre-Ta germline . no 172 .