euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

227 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip358 chr1 41502725 41502725 + L1-Ta germline . no 171 LOC100507178;SCMH1
srip834 chr1 56405398 56405398 - L1-Ta germline . no 171 LOC100507652
srip1980 chr1 81855783 81855783 + L1-Ta germline . no 171 .
srip3128 chr1 104646045 104646045 + L1-Ta germline . no 171 .
srip3282 chr1 105857777 105857777 - L1-Ta germline . no 171 .
srip3913 chr1 120266555 120266555 + L1-Ta somatic validated no 171 PHGDH
srip3923 chr1 121354774 121354774 + L1-Ta germline . no 171 .
srip4023 chr1 149216797 149216797 + L1-Ta germline . no 171 .
srip4486 chr1 158853726 158853726 + L1-Ta germline . no 171 .
srip4527 chr1 162015887 162015887 - L1-Ta germline . no 171 .
srip5022 chr1 169524859 169524859 + L1-Ta germline . no 171 F5
srip5535 chr1 183969672 183969672 - L1-Ta germline . no 171 GLT25D2
srip6344 chr1 207579511 207579511 + L1-Ta germline . no 171 .
srip7769 chr10 16031588 16031588 + L1-Ta germline . no 171 .
srip7812 chr10 19065785 19065785 - L1-Ta germline . no 171 .
srip8401 chr10 25707687 25707687 - L1-Ta germline . no 171 GPR158
srip8905 chr10 53192468 53192468 - L1-Ta germline . no 171 PRKG1
srip11190 chr10 110453470 110453470 + L1-Ta germline . no 171 .
srip11846 chr10 124455231 124455231 + L1-Ta germline . no 171 .
srip11894 chr10 126983631 126983631 - L1-Ta germline . no 171 .
srip11906 chr10 126983646 126983646 - L1-Ta germline . no 171 .
srip12227 chr11 4415929 4415929 - L1-Ta germline . no 171 .
srip12263 chr11 7435902 7435902 - L1-Ta germline . no 171 SYT9
srip13264 chr11 30180463 30180463 + L1-Ta germline . no 171 .
srip13772 chr11 33670123 33670123 + L1-Ta germline . no 171 C11orf41
srip13944 chr11 39225160 39225160 - L1-Ta germline . no 171 .
srip13977 chr11 40841271 40841271 + L1-Ta germline . no 171 .
srip14737 chr11 48360753 48360753 - L1-Ta germline . no 171 .
srip16788 chr11 87404009 87404009 - L1-Ta germline . no 171 .
srip19295 chr11 134305648 134305648 - L1-Ta germline . no 171 .
srip20365 chr12 24217996 24217996 + L1-Ta germline . no 171 SOX5
srip20699 chr12 28226413 28226413 - L1-Ta germline . no 171 .
srip21111 chr12 33790037 33790037 + L1-Ta germline . no 171 .
srip22239 chr12 43256986 43256986 - L1-Ta germline . no 171 .
srip22486 chr12 44542592 44542592 + L1-Ta germline . no 171 TMEM117
srip24019 chr12 79338037 79338037 - L1-Ta germline . no 171 SYT1
srip24412 chr12 84955216 84955216 - L1-Ta germline . no 171 .
srip24905 chr12 85506290 85506290 + L1-Ta germline . no 171 LRRIQ1
srip25110 chr12 95808527 95808527 - L1-Ta germline . no 171 .
srip25332 chr12 101574502 101574502 + L1-Ta somatic validated no 171 SLC5A8
srip25385 chr12 107590482 107590482 - L1-Ta germline . no 171 .
srip25985 chr12 118186926 118186926 + L1-Ta germline . no 171 KSR2
srip26347 chr12 126802929 126802929 - L1-Ta germline . no 171 .
srip26739 chr13 21514956 21514956 - L1-Ta germline . no 171 .
srip26747 chr13 21514971 21514971 - L1-Ta germline . no 171 .
srip27000 chr13 22489805 22489805 + L1-Ta germline . no 171 .
srip28431 chr13 58556528 58556528 + L1-Ta germline . no 171 .
srip29603 chr13 61734485 61734485 + L1-Ta germline . no 171 .
srip30216 chr13 70521044 70521044 - L1-Ta germline . no 171 KLHL1
srip30383 chr13 72968682 72968682 + L1-Ta germline . no 171 .
srip30998 chr13 79259793 79259793 - L1-Ta germline . no 171 .
srip31406 chr13 85871602 85871602 - L1-Ta germline . no 171 .
srip33473 chr13 104296223 104296223 - L1-Ta germline . no 171 .
srip33630 chr13 104395943 104395943 - L1-Ta germline . no 171 .
srip33772 chr13 105280146 105280146 - L1-Ta germline . no 171 .
srip35231 chr14 28301261 28301261 + L1-Ta germline . no 171 .
srip36011 chr14 36674760 36674760 + L1-Ta germline . no 171 .
srip36065 chr14 37769602 37769602 - L1-Ta germline . no 171 MIPOL1
srip37130 chr14 52667758 52667758 - L1-Ta germline . no 171 .
srip37839 chr14 67419863 67419863 - L1-Ta germline . no 171 GPHN
srip38597 chr14 86381796 86381796 - L1-Ta germline . no 171 .
srip39023 chr15 22412531 22412531 - L1-Ta germline . no 171 .
srip40919 chr15 53956099 53956099 + L1-Ta germline . no 171 WDR72
srip41235 chr15 56251153 56251153 + L1-Ta germline . no 171 NEDD4
srip43040 chr15 98622504 98622504 + L1-Ta germline . no 171 .
srip44758 chr16 32523893 32523893 - L1-Ta germline . no 171 .
srip45035 chr16 32525611 32525611 - L1-Ta germline . no 171 .
srip45462 chr16 33992430 33992430 + L1-Ta germline . no 171 .
srip45573 chr16 51803074 51803074 + L1-Ta germline . no 171 .
srip45850 chr16 61079188 61079188 + L1-Ta germline . no 171 .
srip47341 chr17 28398313 28398313 + L1-Ta germline . no 171 EFCAB5
srip47577 chr17 32813605 32813605 + L1-Ta germline . no 171 .
srip49425 chr18 28732902 28732902 - L1-Ta germline . no 171 DSC1
srip49995 chr18 49216219 49216219 - L1-Ta germline . no 171 .
srip50336 chr18 51425726 51425726 - L1-Ta germline . no 171 .
srip50704 chr18 51762730 51762730 - L1-Ta germline . no 171 .
srip51810 chr18 74960068 74960068 - L1-Ta germline . no 171 .
srip52415 chr19 44979614 44979614 + L1-Ta germline . no 171 .
srip52439 chr19 45444699 45444699 + L1-Ta germline . no 171 .
srip52761 chr2 6798288 6798288 - L1-Ta germline . no 171 .
srip53417 chr2 23191000 23191000 - L1-Ta germline . no 171 .
srip53718 chr2 29645155 29645155 - L1-Ta germline validated no 171 ALK
srip53938 chr2 35879359 35879359 + L1-Ta germline . no 171 .
srip54327 chr2 36619715 36619715 + L1-Ta germline . no 171 CRIM1
srip54402 chr2 41913652 41913652 - L1-Ta germline . no 171 .
srip54580 chr2 42051403 42051403 + L1-Ta germline . no 171 .
srip54903 chr2 53460052 53460052 + L1-Ta germline . no 171 .
srip56230 chr2 82098043 82098043 + L1-Ta germline . no 171 .
srip56489 chr2 83188325 83188325 + L1-Ta germline . no 171 .
srip56662 chr2 92319790 92319790 - L1-Ta germline . no 171 .
srip56895 chr2 106163164 106163164 + L1-Ta germline . no 171 .
srip57651 chr2 129372166 129372166 + L1-Ta germline . no 171 .
srip58199 chr2 141852908 141852908 - L1-Ta germline . no 171 LRP1B
srip58258 chr2 142771742 142771742 - L1-Ta germline . no 171 LRP1B
srip58320 chr2 142785302 142785302 + L1-Ta germline . no 171 LRP1B
srip58668 chr2 144626235 144626235 + L1-pre-Ta germline . no 171 .
srip59265 chr2 150889037 150889037 - L1-Ta germline . no 171 .
srip59488 chr2 154100589 154100589 - L1-Ta germline . no 171 .
srip59890 chr2 174534152 174534152 + L1-Ta germline . no 171 .
srip60118 chr2 178676245 178676245 - L1-Ta germline . no 171 PDE11A
srip62162 chr2 221503768 221503768 - L1-Ta germline . no 171 .
srip62461 chr2 232482740 232482740 + L1-Ta germline . no 171 .
srip62603 chr2 235519794 235519794 + L1-Ta germline . no 171 .
srip63927 chr20 22501649 22501649 + L1-Ta germline . no 171 .
srip65606 chr21 17134462 17134462 + L1-Ta germline . no 171 USP25
srip66244 chr21 23626191 23626191 - L1-Ta germline . no 171 .
srip66851 chr21 29069171 29069171 + L1-Ta germline . no 171 .
srip67820 chr22 22715588 22715588 + L1-Ta germline . no 171 IGL@
srip68893 chr22 44324605 44324605 - L1-Ta germline . no 171 PNPLA3
srip70001 chr3 6635238 6635238 - L1-Ta germline . no 171 .
srip70024 chr3 6752728 6752728 - L1-Ta germline . no 171 .
srip70049 chr3 17409573 17409573 - L1-Ta germline . no 171 TBC1D5
srip70611 chr3 21800882 21800882 + L1-Ta germline . no 171 .
srip73394 chr3 59852903 59852903 + L1-Ta germline . no 171 FHIT
srip73769 chr3 75101216 75101216 + L1-Ta germline . no 171 .
srip74420 chr3 80590163 80590163 - L1-Ta germline . no 171 .
srip74837 chr3 82144854 82144854 - L1-Ta germline . no 171 .
srip75087 chr3 84433395 84433395 + L1-Ta germline . no 171 .
srip75889 chr3 89022346 89022346 - L1-Ta germline . no 171 .
srip76605 chr3 109751770 109751770 + L1-Ta germline . no 171 .
srip76798 chr3 119046413 119046413 + L1-Ta germline . no 171 ARHGAP31
srip76855 chr3 120680054 120680054 - L1-Ta somatic validated no 171 STXBP5L
srip78301 chr3 145663473 145663473 + L1-Ta germline . no 171 .
srip79311 chr3 162717306 162717306 + L1-Ta germline . no 171 .
srip79910 chr3 170999415 170999415 - L1-Ta germline . no 171 TNIK
srip80375 chr3 176091333 176091333 + L1-Ta germline . no 171 .
srip81502 chr3 186372141 186372141 + L1-Ta germline . no 171 .
srip81625 chr3 187835309 187835309 - L1-Ta germline . no 171 .
srip82129 chr3 193354175 193354175 - L1-Ta germline . no 171 OPA1
srip83255 chr4 18194357 18194357 - L1-Ta germline . no 171 .
srip83324 chr4 20246382 20246382 + L1-Ta germline . no 171 .
srip85441 chr4 57497067 57497067 - L1-Ta germline . no 171 .
srip85817 chr4 58917529 58917529 - L1-Ta germline . no 171 .
srip86183 chr4 66413932 66413932 + L1-Ta germline . no 171 EPHA5
srip86605 chr4 69572737 69572737 - L1-Ta germline . no 171 LOC728811
srip87754 chr4 85249967 85249967 + L1-Ta germline . no 171 .
srip89248 chr4 107095004 107095004 - L1-Ta germline . no 171 TBCK
srip89583 chr4 110248316 110248316 - L1-Ta germline . no 171 .
srip89656 chr4 110248332 110248332 - L1-Ta germline . no 171 .
srip89978 chr4 112628973 112628973 + L1-Ta germline . no 171 .
srip90392 chr4 116660152 116660152 - L1-Ta germline . no 171 .
srip90698 chr4 118765255 118765255 + L1-Ta germline . no 171 .
srip92756 chr4 138177325 138177325 + L1-Ta germline . no 171 .
srip93091 chr4 147225296 147225296 + L1-Ta germline . no 171 SLC10A7
srip93742 chr4 157447970 157447970 + L1-Ta germline . no 171 .
srip94406 chr4 169413099 169413099 - L1-Ta germline . no 171 .
srip94960 chr4 178471522 178471522 - L1-Ta germline . no 171 .
srip95064 chr4 182418058 182418058 - L1-Ta germline . no 171 .
srip96781 chr5 16883042 16883042 - L1-Ta germline . no 171 MYO10
srip97336 chr5 30975979 30975979 + L1-Ta germline . no 171 .
srip97936 chr5 33633348 33633348 - L1-Ta germline . no 171 ADAMTS12
srip98026 chr5 33797544 33797544 - L1-Ta germline . no 171 ADAMTS12
srip98285 chr5 40041336 40041336 - L1-Ta germline . no 171 .
srip98585 chr5 46396964 46396964 + L1-Ta germline . no 171 .
srip98637 chr5 49421077 49421077 - L1-Ta germline . no 171 .
srip98863 chr5 51922573 51922573 - L1-Ta germline . no 171 .
srip100067 chr5 84239673 84239673 - L1-Ta germline . no 171 .
srip100750 chr5 89450781 89450781 + L1-Ta germline . no 171 .
srip101050 chr5 96866407 96866407 + L1-Ta germline . no 171 .
srip102237 chr5 109480258 109480258 - L1-Ta germline . no 171 .
srip102512 chr5 109567542 109567542 + L1-Ta germline . no 171 .
srip102743 chr5 112703081 112703081 + L1-Ta germline validated no 171 MCC
srip102769 chr5 115449063 115449063 - L1-pre-Ta germline . no 171 COMMD10
srip103755 chr5 137014775 137014775 - L1-Ta germline . no 171 KLHL3
srip104004 chr5 143413889 143413889 + L1-Ta germline . no 171 .
srip104218 chr5 144331013 144331013 - L1-Ta germline . no 171 .
srip104828 chr5 154873933 154873933 - L1-Ta germline . no 171 .
srip107072 chr6 13191033 13191033 + L1-Ta germline . no 171 PHACTR1
srip107530 chr6 13503049 13503049 + L1-Ta germline . no 171 .
srip107594 chr6 16417684 16417684 - L1-Ta germline . no 171 ATXN1
srip107620 chr6 16950957 16950957 - L1-Ta germline . no 171 .
srip108077 chr6 32613444 32613444 + L1-Ta germline . no 171 .
srip108132 chr6 34886957 34886957 + L1-Ta germline . no 171 ANKS1A
srip108257 chr6 45852697 45852697 - L1-Ta germline . no 171 .
srip109566 chr6 63415756 63415756 + L1-Ta germline . no 171 .
srip109934 chr6 68112755 68112755 - L1-Ta germline . no 171 .
srip110663 chr6 77379922 77379922 - L1-Ta germline . no 171 .
srip111061 chr6 77980650 77980650 - L1-Ta germline . no 171 .
srip111197 chr6 78649689 78649689 - L1-Ta germline . no 171 .
srip111271 chr6 78749392 78749392 + L1-Ta germline . no 171 .
srip112162 chr6 91669521 91669521 - L1-Ta germline . no 171 .
srip112277 chr6 91767655 91767655 + L1-Ta germline . no 171 .
srip113005 chr6 114091140 114091140 + L1-Ta germline . no 171 LOC100652953
srip114858 chr6 154215663 154215663 + L1-Ta germline . no 171 .
srip115055 chr6 157968737 157968737 - L1-Ta germline . no 171 ZDHHC14
srip115544 chr6 162181257 162181257 + L1-Ta germline . no 171 PARK2
srip116427 chr7 21927847 21927847 + L1-Ta germline . no 171 DNAH11
srip117071 chr7 45485689 45485689 + L1-Ta germline . no 171 .
srip117468 chr7 52789472 52789472 + L1-Ta germline . no 171 .
srip117949 chr7 61778308 61778308 - L1-Ta germline . no 171 .
srip118172 chr7 62492930 62492930 + L1-Ta germline . no 171 .
srip119836 chr7 84901724 84901724 - L1-Ta germline . no 171 .
srip120214 chr7 85044737 85044737 + L1-Ta germline . no 171 .
srip120527 chr7 90331907 90331907 - L1-Ta germline . no 171 .
srip120928 chr7 95000591 95000591 - L1-Ta germline . no 171 PON3
srip121768 chr7 107829263 107829263 + L1-Ta germline . no 171 NRCAM
srip122233 chr7 110484749 110484749 + L1-Ta germline . no 171 IMMP2L
srip122294 chr7 111232935 111232935 - L1-Ta germline . no 171 .
srip122589 chr7 119446561 119446561 - L1-Ta germline . no 171 .
srip122699 chr7 126582159 126582159 + L1-Ta germline . no 171 GRM8
srip123339 chr7 142818667 142818667 + L1-Ta germline . no 171 .
srip123661 chr7 146795524 146795524 - L1-Ta germline . no 171 CNTNAP2
srip123758 chr7 156658760 156658760 + L1-Ta germline . no 171 LMBR1
srip124856 chr8 13898766 13898766 + L1-Ta germline . no 171 .
srip125403 chr8 24926545 24926545 - L1-Ta germline . no 171 .
srip126897 chr8 67381885 67381885 - L1-Ta germline . no 171 .
srip127312 chr8 72399221 72399221 - L1-Ta germline . no 171 .
srip128005 chr8 83740679 83740679 + L1-Ta germline . no 171 .
srip128221 chr8 87315040 87315040 + L1-Ta germline . no 171 .
srip129008 chr8 115773126 115773126 + L1-Ta germline . no 171 .
srip129144 chr8 115788580 115788580 - L1-Ta germline . no 171 .
srip129481 chr8 115881781 115881781 + L1-Ta germline . no 171 .
srip130094 chr8 131041219 131041219 + L1-Ta germline . no 171 .
srip130563 chr9 4265400 4265400 + L1-Ta germline . no 171 GLIS3
srip130722 chr9 5491418 5491418 + L1-Ta germline . no 171 .
srip131194 chr9 7426798 7426798 - L1-Ta germline . no 171 .
srip133423 chr9 32463894 32463894 - L1-Ta germline . no 171 DDX58
srip133654 chr9 35883708 35883708 + L1-Ta germline . no 171 .
srip135971 chr9 118083880 118083880 - L1-Ta germline . no 171 DEC1
srip136028 chr9 121394590 121394590 - L1-Ta germline . no 171 .
srip136522 chrX 14152012 14152012 - L1-Ta germline . no 171 .
srip136766 chrX 24384651 24384651 - L1-Ta germline . no 171 .
srip139417 chrX 85781782 85781782 + L1-Ta germline . no 171 DACH2
srip141119 chrX 123612276 123612276 - L1-Ta germline . no 171 ODZ1
srip141151 chrX 123921246 123921246 - L1-Ta germline . no 171 ODZ1
srip141461 chrX 130495439 130495439 - L1-Ta germline . no 171 .
srip142205 chrY 9951878 9951878 - L1-pre-Ta germline . no 171 .