euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

238 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1331 chr1 67544680 67544680 + unknown germline . yes 363 .
srip1724 chr1 75192881 75192881 - unknown germline . no 363 CRYZ
srip3357 chr1 111295490 111295490 - unknown germline . no 363 .
srip3467 chr1 111526302 111526302 - unknown germline . no 363 .
srip3774 chr1 119553342 119553342 + unknown germline . no 363 .
srip4357 chr1 158238966 158238966 - unknown germline . no 363 .
srip4910 chr1 169524846 169524846 + unknown germline . no 363 F5
srip5702 chr1 189686334 189686334 + unknown germline . no 363 .
srip6194 chr1 194934626 194934626 - unknown germline . no 363 .
srip6584 chr1 220378213 220378213 - unknown germline . no 363 RAB3GAP2
srip8260 chr10 25707676 25707676 - unknown germline . no 363 GPR158
srip9296 chr10 67260458 67260458 + unknown germline . no 363 .
srip9504 chr10 68803675 68803675 + unknown germline . no 363 LRRTM3;CTNNA3
srip9739 chr10 78577575 78577575 - unknown germline . no 363 .
srip10145 chr10 87505368 87505368 - unknown germline . no 363 GRID1
srip10955 chr10 110453451 110453451 + unknown germline . no 363 .
srip11540 chr10 123180643 123180643 - unknown germline . no 363 .
srip11667 chr10 124455206 124455206 + unknown germline . no 363 .
srip12081 chr11 1112673 1112673 - unknown germline . no 363 .
srip12750 chr11 25123328 25123328 - unknown germline . no 363 .
srip13364 chr11 31850361 31850361 + unknown germline . no 363 DKFZp686K1684
srip13469 chr11 33670111 33670111 + unknown germline . no 363 C11orf41
srip14046 chr11 41831785 41831785 - unknown germline . no 363 .
srip15205 chr11 58171824 58171824 + unknown germline . no 363 .
srip15628 chr11 60364495 60364495 - unknown germline . no 363 .
srip16251 chr11 79917402 79917402 + unknown germline . yes 363 .
srip16609 chr11 83750344 83750344 - unknown germline . no 363 DLG2
srip16934 chr11 94684350 94684350 + unknown germline . no 363 .
srip17900 chr11 110377868 110377868 - unknown germline . no 363 .
srip18751 chr11 134305626 134305626 - unknown germline . no 363 .
srip19412 chr12 5225709 5225709 + unknown germline . no 363 .
srip20564 chr12 28226400 28226400 - unknown germline . no 363 .
srip21221 chr12 34276519 34276519 - unknown germline . no 363 .
srip21389 chr12 34346159 34346159 + unknown germline . no 363 .
srip22041 chr12 43256961 43256961 - unknown germline . no 363 .
srip22938 chr12 55782210 55782210 + unknown germline . no 363 .
srip24244 chr12 84955187 84955187 - unknown germline . no 363 .
srip24677 chr12 85147687 85147687 + unknown germline . no 363 .
srip24719 chr12 85506264 85506264 + unknown germline . no 363 LRRIQ1
srip25705 chr12 118057334 118057334 - unknown germline . no 363 KSR2
srip25858 chr12 118186914 118186914 + unknown germline . no 363 KSR2
srip27055 chr13 24683488 24683488 - unknown germline . no 363 .
srip27176 chr13 27488098 27488098 + unknown germline . no 363 .
srip27706 chr13 37724174 37724174 + unknown germline . no 363 .
srip28778 chr13 61462321 61462321 - unknown germline . no 363 .
srip30411 chr13 74613182 74613182 - unknown germline . no 363 KLF12
srip30473 chr13 75958206 75958206 + unknown germline . no 363 TBC1D4
srip30741 chr13 79259770 79259770 - unknown germline . no 363 .
srip31271 chr13 85871588 85871588 - unknown germline . no 363 .
srip32119 chr13 88108003 88108003 - unknown germline . no 363 MIR4500HG
srip32566 chr13 96116756 96116756 - unknown germline . no 363 CLDN10
srip32783 chr13 97350602 97350602 - unknown germline . no 363 HS6ST3
srip32915 chr13 97421625 97421625 + unknown germline . no 363 HS6ST3
srip33072 chr13 101391109 101391109 + unknown germline . no 363 .
srip33272 chr13 104296211 104296211 - unknown germline . no 363 .
srip33877 chr13 106623455 106623455 - unknown germline . no 363 .
srip34108 chr13 107857461 107857461 - unknown germline . no 363 FAM155A
srip35416 chr14 31150794 31150794 - unknown germline . no 363 SCFD1
srip35653 chr14 36674732 36674732 + unknown germline . no 363 .
srip36140 chr14 39875072 39875072 + unknown germline . no 363 FBXO33
srip36437 chr14 42122864 42122864 + unknown germline . no 363 LRFN5
srip36516 chr14 42274786 42274786 - unknown germline . no 363 LRFN5
srip36632 chr14 43197213 43197213 + unknown germline . no 363 .
srip36832 chr14 46651945 46651945 - unknown germline . no 363 .
srip38492 chr14 86381784 86381784 - unknown germline . no 363 .
srip39187 chr15 28175778 28175778 - unknown germline . no 363 OCA2
srip40013 chr15 47507319 47507319 - unknown germline . no 363 SEMA6D
srip41384 chr15 59794476 59794476 - unknown germline . no 363 FAM81A
srip42104 chr15 72085476 72085476 + unknown germline . no 363 .
srip42343 chr15 83551609 83551609 - unknown germline . no 363 HOMER2
srip42828 chr15 98051276 98051276 + unknown germline . no 363 .
srip43116 chr15 100931133 100931133 - unknown germline . no 363 .
srip43702 chr16 6987037 6987037 + unknown germline . no 363 RBFOX1
srip44253 chr16 20365406 20365406 - unknown germline . no 363 .
srip45254 chr16 33976979 33976979 - unknown germline . no 363 .
srip45363 chr16 33992419 33992419 + unknown germline . no 363 .
srip45615 chr16 53436718 53436718 - unknown germline . no 363 .
srip46892 chr17 22150203 22150203 - unknown germline . no 363 .
srip47081 chr17 28398292 28398292 + unknown germline . no 363 EFCAB5
srip47802 chr17 34272141 34272141 + unknown germline . no 363 .
srip48255 chr17 68357385 68357385 + unknown germline . no 363 .
srip48524 chr17 70446738 70446738 - unknown germline . no 363 LOC100499467
srip49602 chr18 34567349 34567349 - unknown germline . yes 363 KIAA1328
srip49909 chr18 49216206 49216206 - unknown germline . no 363 .
srip50952 chr18 59579948 59579948 + unknown germline . no 363 .
srip51475 chr18 73259841 73259841 + unknown germline . no 363 .
srip52056 chr19 22500496 22500496 - unknown germline . no 363 .
srip52110 chr19 23825804 23825804 - unknown germline . no 363 .
srip52228 chr19 27793326 27793326 - unknown germline . no 363 .
srip52962 chr2 13631539 13631539 - unknown germline . no 363 .
srip53240 chr2 23190984 23190984 - unknown germline . no 363 .
srip54006 chr2 36381231 36381231 + unknown germline . no 363 .
srip54143 chr2 36570229 36570229 - unknown germline . no 363 .
srip54451 chr2 42051389 42051389 + unknown germline . no 363 .
srip55411 chr2 72413315 72413315 - unknown germline . no 363 EXOC6B
srip55854 chr2 80826972 80826972 - unknown germline . no 363 CTNNA2
srip57093 chr2 108901173 108901173 - unknown germline . no 363 .
srip58430 chr2 144010765 144010765 + unknown germline . no 363 ARHGAP15
srip58764 chr2 147020911 147020911 + unknown germline . no 363 .
srip59987 chr2 178676240 178676240 - unknown germline . no 363 PDE11A
srip60588 chr2 182473910 182473910 + unknown germline . no 363 CERKL
srip60944 chr2 198499515 198499515 + unknown germline . no 363 RFTN2
srip61440 chr2 209682250 209682250 - unknown germline . no 363 .
srip61872 chr2 221278206 221278206 - unknown germline . no 363 .
srip63376 chr20 16479480 16479480 - unknown germline . no 363 KIF16B
srip64224 chr20 29638560 29638560 + unknown germline . no 363 .
srip64652 chr20 41952086 41952086 - unknown germline . no 363 .
srip65011 chr20 44157049 44157049 - unknown germline . no 363 .
srip65703 chr21 19517286 19517286 - unknown germline . no 363 .
srip66348 chr21 24060316 24060316 - unknown germline . no 363 .
srip66673 chr21 29069160 29069160 + unknown germline . no 363 .
srip67626 chr22 22715563 22715563 + unknown germline . no 363 IGL@
srip68001 chr22 29007687 29007687 - unknown germline . yes 363 TTC28
srip68347 chr22 41019372 41019372 - unknown germline . no 363 MKL1
srip68634 chr22 44324578 44324578 - unknown germline . no 363 PNPLA3
srip69925 chr3 5189072 5189072 - unknown germline . no 363 ARL8B
srip70695 chr3 24987849 24987849 - unknown germline . no 363 .
srip71225 chr3 27239558 27239558 - unknown germline . no 363 .
srip71492 chr3 36146939 36146939 - unknown germline . no 363 .
srip72237 chr3 55010457 55010457 + unknown germline . no 363 CACNA2D3
srip72421 chr3 55788556 55788556 + unknown germline . no 363 ERC2
srip72918 chr3 59852877 59852877 + unknown germline . no 363 FHIT
srip73620 chr3 75101200 75101200 + unknown germline . no 363 .
srip74540 chr3 81307625 81307625 - unknown germline . no 363 .
srip75155 chr3 84593258 84593258 - unknown germline . no 363 .
srip75366 chr3 85576539 85576539 + unknown germline . no 363 CADM2
srip76257 chr3 101936459 101936459 + unknown germline . no 363 .
srip76976 chr3 123590700 123590700 + unknown germline . no 363 MYLK
srip77659 chr3 134411227 134411227 - unknown germline . no 363 .
srip78111 chr3 143121747 143121747 - unknown germline . no 363 SLC9A9
srip79018 chr3 157620508 157620508 - unknown germline . no 363 .
srip79524 chr3 166764464 166764464 - unknown germline . no 363 .
srip79989 chr3 173917195 173917195 - unknown germline . no 363 NLGN1
srip81011 chr3 184677979 184677979 - unknown germline . no 363 VPS8
srip81903 chr3 193354152 193354152 - unknown germline . no 363 OPA1
srip82260 chr4 5667970 5667970 - unknown germline . no 363 EVC2
srip83984 chr4 37952095 37952095 - unknown germline . no 363 TBC1D1
srip84379 chr4 45890702 45890702 - unknown germline . no 363 .
srip85192 chr4 56713958 56713958 - unknown germline . no 363 .
srip86464 chr4 68282406 68282406 - unknown germline . no 363 .
srip87537 chr4 81242092 81242092 - unknown germline . no 363 .
srip87967 chr4 88461091 88461091 - unknown germline . no 363 .
srip88202 chr4 98560434 98560434 - unknown germline . no 363 C4orf37
srip88472 chr4 103043669 103043669 - unknown germline . no 363 .
srip88705 chr4 103343731 103343731 + unknown germline . no 363 .
srip88973 chr4 104214676 104214676 + unknown germline . no 363 .
srip89101 chr4 104930177 104930177 + unknown germline . no 363 .
srip89516 chr4 110248303 110248303 - unknown germline . no 363 .
srip89767 chr4 112628948 112628948 + unknown germline . no 363 .
srip90073 chr4 115132680 115132680 + unknown germline . no 363 .
srip90953 chr4 125208813 125208813 + unknown germline . no 363 .
srip91370 chr4 131551685 131551685 + unknown germline . no 363 .
srip91696 chr4 132357338 132357338 + unknown germline . no 363 .
srip92409 chr4 138177310 138177310 + unknown germline . no 363 .
srip93346 chr4 152732795 152732795 - unknown germline . no 363 .
srip93491 chr4 153061908 153061908 - unknown germline . no 363 .
srip94227 chr4 167476673 167476673 - unknown germline . no 363 .
srip94752 chr4 177308485 177308485 - unknown germline . no 363 .
srip96546 chr5 15913061 15913061 + unknown germline . no 363 FBXL7
srip97267 chr5 29575784 29575784 + unknown germline . no 363 .
srip97425 chr5 33633321 33633321 - unknown germline . no 363 ADAMTS12
srip98705 chr5 51388235 51388235 + unknown germline . no 363 .
srip99389 chr5 68263449 68263449 - unknown germline . no 363 .
srip100235 chr5 89450757 89450757 + unknown germline . no 363 .
srip101130 chr5 96952628 96952628 - unknown germline . no 363 .
srip101792 chr5 108777423 108777423 - unknown germline . no 363 .
srip102042 chr5 109480243 109480243 - unknown germline . no 363 .
srip103657 chr5 137014764 137014764 - unknown germline . no 363 KLHL3
srip104433 chr5 147338105 147338105 - unknown germline . yes 363 .
srip104666 chr5 152982343 152982343 - unknown germline . no 363 GRIA1
srip105003 chr5 155619852 155619852 + unknown germline . no 363 .
srip105617 chr5 160435636 160435636 - unknown germline . no 363 .
srip106181 chr5 177401287 177401287 + unknown germline . no 363 .
srip106421 chr5 180329628 180329628 + unknown germline . no 363 BTNL8
srip106810 chr6 12237456 12237456 - unknown germline . no 363 .
srip106945 chr6 13191006 13191006 + unknown germline . no 363 PHACTR1
srip107178 chr6 13503024 13503024 + unknown germline . no 363 .
srip109378 chr6 63368184 63368184 + unknown germline . no 363 .
srip109647 chr6 65105560 65105560 - unknown germline . no 363 EYS
srip110755 chr6 77980628 77980628 - unknown germline . no 363 .
srip111692 chr6 90839145 90839145 - unknown germline . no 363 BACH2
srip111860 chr6 91669497 91669497 - unknown germline . no 363 .
srip112476 chr6 102283722 102283722 - unknown germline . no 363 GRIK2
srip113686 chr6 142450086 142450086 - unknown germline . no 363 .
srip114505 chr6 148195781 148195781 + unknown germline . no 363 .
srip115280 chr6 162181244 162181244 + unknown germline . no 363 PARK2
srip115789 chr6 162731404 162731404 + unknown germline . no 363 PARK2
srip115881 chr6 163113050 163113050 - unknown germline . no 363 PARK2
srip116836 chr7 41310762 41310762 - unknown germline . no 363 .
srip117761 chr7 57728143 57728143 - unknown germline . no 363 LOC100287663
srip118065 chr7 62492918 62492918 + unknown germline . no 363 .
srip119029 chr7 76919295 76919295 + unknown germline . no 363 CCDC146
srip119503 chr7 84901705 84901705 - unknown germline . no 363 .
srip120002 chr7 85044725 85044725 + unknown germline . no 363 .
srip120286 chr7 85291647 85291647 - unknown germline . no 363 .
srip120599 chr7 92680706 92680706 - unknown germline . no 363 .
srip120694 chr7 92857551 92857551 - unknown germline . no 363 .
srip121045 chr7 105459573 105459573 - unknown germline . no 363 ATXN7L1
srip121261 chr7 107829239 107829239 + unknown germline . no 363 NRCAM
srip122776 chr7 127603391 127603391 + unknown germline . no 363 SND1
srip123253 chr7 142818636 142818636 + unknown germline . no 363 .
srip124171 chr8 5829265 5829265 - unknown germline . no 363 .
srip125072 chr8 23645882 23645882 + unknown germline . no 363 .
srip125139 chr8 24421536 24421536 - unknown germline . no 363 .
srip125912 chr8 51013839 51013839 + unknown germline . no 363 SNTG1
srip126177 chr8 56620569 56620569 - unknown germline . no 363 .
srip126509 chr8 64686904 64686904 - unknown germline . no 363 LOC286184
srip126667 chr8 67381850 67381850 - unknown germline . no 363 .
srip127090 chr8 72399210 72399210 - unknown germline . no 363 .
srip127719 chr8 83640785 83640785 + unknown germline . no 363 .
srip128339 chr8 90170793 90170793 + unknown germline . no 363 .
srip129064 chr8 115788554 115788554 - unknown germline . no 363 .
srip129256 chr8 115881756 115881756 + unknown germline . no 363 .
srip129860 chr8 127744231 127744231 - unknown germline . no 363 .
srip130224 chr8 132865833 132865833 + unknown germline . no 363 .
srip130800 chr9 6290459 6290459 + unknown germline . no 363 .
srip131975 chr9 29114733 29114733 - unknown germline . no 363 .
srip132148 chr9 29998832 29998832 - unknown germline . no 363 .
srip133727 chr9 66314291 66314291 - unknown germline . no 363 .
srip133849 chr9 68494241 68494241 - unknown germline . no 363 .
srip134183 chr9 82082766 82082766 - unknown germline . no 363 .
srip135740 chr9 118083818 118083818 - unknown germline . no 363 DEC1
srip136236 chrX 4659582 4659582 - unknown germline . no 363 .
srip136421 chrX 14151990 14151990 - unknown germline . no 363 .
srip136649 chrX 21333092 21333092 + unknown germline . no 363 .
srip136839 chrX 33425638 33425638 + unknown germline . no 363 .
srip137123 chrX 54790788 54790788 + unknown germline . no 363 ITIH5L
srip137404 chrX 55585135 55585135 - unknown germline . no 363 .
srip137691 chrX 58482468 58482468 - unknown germline . no 363 .
srip138844 chrX 75949527 75949527 - unknown germline . no 363 .
srip139221 chrX 83000964 83000964 - unknown germline . no 363 .
srip139574 chrX 97942374 97942374 - unknown germline . no 363 .
srip139648 chrX 98264276 98264276 - unknown germline . no 363 .
srip139866 chrX 101252237 101252237 + unknown germline . no 363 .
srip139994 chrX 102363162 102363162 + unknown germline . no 363 .
srip140581 chrX 117951425 117951425 - unknown germline . no 363 .
srip140685 chrX 119892816 119892816 - unknown germline . no 363 .
srip141682 chrX 138246341 138246341 + unknown germline . no 363 FGF13