euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

241 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip60 chr1 14163093 14163093 + L1-Ta germline . no 176 .
srip503 chr1 42483961 42483961 + L1-Ta germline . no 176 HIVEP3
srip837 chr1 56405398 56405398 - L1-Ta germline . no 176 LOC100507652
srip1985 chr1 81855783 81855783 + L1-Ta germline . no 176 .
srip3133 chr1 104646045 104646045 + L1-Ta germline . no 176 .
srip4026 chr1 149216797 149216797 + L1-Ta germline . no 176 .
srip5025 chr1 169524859 169524859 + L1-Ta germline . no 176 F5
srip5540 chr1 183969672 183969672 - L1-Ta germline . no 176 GLT25D2
srip6349 chr1 207579511 207579511 + L1-Ta germline . no 176 .
srip6945 chr1 222579116 222579116 - L1-Ta germline . no 176 .
srip7250 chr1 241262724 241262724 - L1-pre-Ta germline . no 176 RGS7
srip7395 chr1 242311577 242311577 + L1-Ta germline validated no 176 PLD5
srip7448 chr1 248454039 248454039 - L1-pre-Ta germline . no 176 .
srip7782 chr10 16709504 16709504 - L1-Ta germline . no 176 RSU1
srip7784 chr10 16709572 16709572 - L1-Ta germline . no 176 RSU1
srip8044 chr10 22492537 22492537 - L1-Ta germline . no 176 .
srip8406 chr10 25707687 25707687 - L1-Ta germline . no 176 GPR158
srip8764 chr10 35420842 35420842 - L1-Ta germline . no 176 CREM
srip8897 chr10 53063103 53063103 - L1-Ta germline . no 176 PRKG1
srip9668 chr10 74767506 74767506 - L1-Ta germline . no 176 P4HA1
srip11193 chr10 110453470 110453470 + L1-Ta germline . no 176 .
srip13775 chr11 33670123 33670123 + L1-Ta germline . no 176 C11orf41
srip13959 chr11 39929856 39929856 + L1-Ta germline . no 176 .
srip14344 chr11 41831811 41831811 - L1-Ta germline . no 176 .
srip14742 chr11 48360753 48360753 - L1-Ta germline . no 176 .
srip17752 chr11 104556130 104556130 - L1-Ta germline . no 176 .
srip18034 chr11 110377879 110377879 - L1-Ta germline . no 176 .
srip19300 chr11 134305648 134305648 - L1-Ta germline . no 176 .
srip20356 chr12 20346841 20346841 - L1-Ta germline . no 176 .
srip20704 chr12 28226413 28226413 - L1-Ta germline . no 176 .
srip21735 chr12 38035076 38035076 + L1-Ta germline . no 176 .
srip22412 chr12 43390135 43390135 - L1-Ta germline . no 176 .
srip24417 chr12 84955216 84955216 - L1-Ta germline . no 176 .
srip24908 chr12 85506290 85506290 + L1-Ta germline . no 176 LRRIQ1
srip25115 chr12 95808527 95808527 - L1-Ta germline . no 176 .
srip25990 chr12 118186926 118186926 + L1-Ta germline . no 176 KSR2
srip26352 chr12 126802929 126802929 - L1-Ta germline . no 176 .
srip26648 chr12 129350781 129350781 - L1-Ta germline . no 176 GLT1D1
srip28434 chr13 58556528 58556528 + L1-Ta germline . no 176 .
srip29035 chr13 61462336 61462336 - L1-Ta germline . no 176 .
srip29606 chr13 61734485 61734485 + L1-Ta germline . no 176 .
srip29787 chr13 64732415 64732415 - L1-Ta germline . no 176 .
srip31003 chr13 79259793 79259793 - L1-Ta germline . no 176 .
srip31411 chr13 85871602 85871602 - L1-Ta germline . no 176 .
srip32746 chr13 96834839 96834839 + L1-Ta germline . no 176 HS6ST3
srip33478 chr13 104296223 104296223 - L1-Ta germline . no 176 .
srip33635 chr13 104395943 104395943 - L1-Ta germline . no 176 .
srip33777 chr13 105280146 105280146 - L1-Ta germline . no 176 .
srip34051 chr13 107845347 107845347 + L1-Ta germline . no 176 FAM155A
srip34272 chr14 19000969 19000969 + L1-Ta germline . no 176 .
srip36016 chr14 36674760 36674760 + L1-Ta germline . no 176 .
srip36377 chr14 40689232 40689232 + L1-Ta germline . no 176 .
srip37135 chr14 52667758 52667758 - L1-Ta germline . no 176 .
srip37844 chr14 67419863 67419863 - L1-Ta germline . no 176 GPHN
srip37944 chr14 68784244 68784244 + L1-Ta germline . no 176 RAD51B
srip39501 chr15 34031839 34031839 - L1-Ta germline . no 176 RYR3
srip40201 chr15 47507329 47507329 - L1-Ta germline . no 176 SEMA6D
srip40731 chr15 51843819 51843819 + L1-Ta germline . no 176 DMXL2
srip41017 chr15 55129551 55129551 + L1-Ta germline . no 176 .
srip41238 chr15 56251153 56251153 + L1-Ta germline . no 176 NEDD4
srip41641 chr15 61328974 61328974 - L1-Ta germline . no 176 RORA
srip43384 chr15 100931161 100931161 - L1-Ta germline . no 176 .
srip43632 chr16 6793831 6793831 + L1-Ta germline . no 176 RBFOX1
srip44078 chr16 17755305 17755305 - L1-Ta germline . no 176 .
srip44524 chr16 27425927 27425927 - L1-Ta germline . no 176 IL21R
srip45040 chr16 32525611 32525611 - L1-Ta germline . no 176 .
srip45466 chr16 33992430 33992430 + L1-Ta germline . no 176 .
srip45522 chr16 34001600 34001600 + L1-Ta germline . no 176 .
srip45576 chr16 51803074 51803074 + L1-Ta germline . no 176 .
srip45855 chr16 61079188 61079188 + L1-Ta germline . no 176 .
srip46461 chr16 86017853 86017853 - L1-Ta germline . no 176 .
srip47344 chr17 28398313 28398313 + L1-Ta germline . no 176 EFCAB5
srip47777 chr17 33835798 33835798 - L1-Ta germline . no 176 .
srip47885 chr17 34272148 34272148 + L1-Ta germline . no 176 .
srip47966 chr17 58587394 58587394 + L1-Ta germline . no 176 APPBP2
srip48888 chr18 12491262 12491262 + L1-Ta germline . no 176 SPIRE1
srip49430 chr18 28732902 28732902 - L1-Ta germline . no 176 DSC1
srip50339 chr18 51425726 51425726 - L1-Ta germline . no 176 .
srip53422 chr2 23191000 23191000 - L1-Ta germline . no 176 .
srip53941 chr2 35879359 35879359 + L1-Ta germline . no 176 .
srip54405 chr2 41913652 41913652 - L1-Ta germline . no 176 .
srip54762 chr2 49386669 49386669 - L1-Ta germline validated no 176 .
srip54768 chr2 50190131 50190131 + L1-Ta germline . no 176 NRXN1
srip54908 chr2 53460052 53460052 + L1-Ta germline . no 176 .
srip55296 chr2 69168896 69168896 - L1-Ta germline . no 176 .
srip56492 chr2 83188325 83188325 + L1-Ta germline . no 176 .
srip56898 chr2 106163164 106163164 + L1-Ta germline . no 176 .
srip57656 chr2 129372166 129372166 + L1-Ta germline . no 176 .
srip59491 chr2 154100589 154100589 - L1-Ta germline . no 176 .
srip60123 chr2 178676245 178676245 - L1-Ta germline . no 176 PDE11A
srip60484 chr2 181000540 181000540 + L1-Ta germline . no 176 .
srip61045 chr2 199454701 199454701 + L1-Ta germline . no 176 .
srip61682 chr2 213114174 213114174 + L1-Ta germline . no 176 ERBB4
srip62464 chr2 232482740 232482740 + L1-Ta germline . no 176 .
srip62608 chr2 235519794 235519794 + L1-Ta germline . no 176 .
srip65350 chr21 10700007 10700007 - L1-pre-Ta germline . no 176 .
srip65611 chr21 17134462 17134462 + L1-Ta germline . no 176 USP25
srip66249 chr21 23626191 23626191 - L1-Ta germline . no 176 .
srip67245 chr22 19210913 19210913 + L1-Ta germline . no 176 CLTCL1
srip67825 chr22 22715588 22715588 + L1-Ta germline . no 176 IGL@
srip67884 chr22 26507199 26507199 - L1-Ta germline . no 176 .
srip69626 chr3 656435 656435 - L1-Ta germline . no 176 .
srip70054 chr3 17409573 17409573 - L1-Ta germline . no 176 TBC1D5
srip70442 chr3 20748896 20748896 - L1-Ta germline . no 176 .
srip70616 chr3 21800882 21800882 + L1-Ta germline . no 176 .
srip70815 chr3 25278891 25278891 - L1-Ta germline . no 176 .
srip71152 chr3 26524464 26524464 - L1-Ta germline . no 176 .
srip71914 chr3 38626082 38626082 + L1-Ta germline . no 176 SCN5A
srip72163 chr3 51097618 51097618 + L1-Ta germline . no 176 DOCK3
srip72735 chr3 55788580 55788580 + L1-Ta germline . no 176 ERC2
srip72776 chr3 56401305 56401305 - L1-Ta germline . no 176 ERC2
srip73399 chr3 59852903 59852903 + L1-Ta germline . no 176 FHIT
srip73534 chr3 69181542 69181542 - L1-Ta germline . no 176 .
srip73552 chr3 73639420 73639420 + L1-Ta germline validated no 176 PDZRN3
srip73554 chr3 73639470 73639470 + L1-Ta germline . no 176 PDZRN3
srip74289 chr3 79758825 79758825 - L1-Ta germline . no 176 ROBO1
srip74842 chr3 82144854 82144854 - L1-Ta germline . no 176 .
srip74962 chr3 83613997 83613997 + L1-Ta germline . no 176 .
srip75671 chr3 85663354 85663354 - L1-Ta germline . no 176 CADM2
srip75828 chr3 86264950 86264950 - L1-Ta germline . no 176 .
srip75893 chr3 89022346 89022346 - L1-Ta germline . no 176 .
srip76429 chr3 105316337 105316337 + L1-Ta germline . no 176 .
srip76610 chr3 109751770 109751770 + L1-Ta germline . no 176 .
srip76802 chr3 119046413 119046413 + L1-Ta germline . no 176 ARHGAP31
srip77266 chr3 123590726 123590726 + L1-Ta germline . no 176 MYLK
srip77499 chr3 131069779 131069779 + L1-Ta germline . no 176 LOC339874
srip78140 chr3 143121759 143121759 - L1-Ta germline . no 176 SLC9A9
srip78584 chr3 151148544 151148544 - L1-Ta germline . no 176 MED12L
srip79314 chr3 162717306 162717306 + L1-Ta germline . no 176 .
srip79680 chr3 168979548 168979548 + L1-Ta germline . no 176 MECOM
srip79937 chr3 172749118 172749118 - L1-Ta germline . no 176 SPATA16
srip80380 chr3 176091333 176091333 + L1-Ta germline . no 176 .
srip81630 chr3 187835309 187835309 - L1-Ta germline . no 176 .
srip83329 chr4 20246382 20246382 + L1-Ta germline . no 176 .
srip83381 chr4 22240607 22240607 + L1-Ta germline . no 176 .
srip84870 chr4 47007790 47007790 - L1-Ta germline . no 176 .
srip85820 chr4 58917529 58917529 - L1-Ta germline . no 176 .
srip86133 chr4 61999375 61999375 + L1-Ta germline . no 176 .
srip86311 chr4 66809050 66809050 - L1-Ta germline . no 176 .
srip86353 chr4 66809078 66809078 - L1-Ta germline . no 176 .
srip86417 chr4 68033656 68033656 + L1-Ta germline . no 176 .
srip86608 chr4 69572737 69572737 - L1-Ta germline . no 176 LOC728811
srip87218 chr4 80768518 80768518 + L1-Ta germline . no 176 GDEP
srip87349 chr4 80768541 80768541 + L1-Ta germline . no 176 GDEP
srip87757 chr4 85249967 85249967 + L1-Ta germline . no 176 .
srip87839 chr4 85432011 85432011 + L1-Ta germline . no 176 .
srip88814 chr4 103343746 103343746 + L1-Ta germline . no 176 .
srip89588 chr4 110248316 110248316 - L1-Ta germline . no 176 .
srip89661 chr4 110248332 110248332 - L1-Ta germline . no 176 .
srip89692 chr4 111863090 111863090 - L1-Ta germline . no 176 .
srip89983 chr4 112628973 112628973 + L1-Ta germline . no 176 .
srip90411 chr4 117041347 117041347 + L1-Ta germline . no 176 .
srip90428 chr4 117151977 117151977 + L1-Ta germline . no 176 .
srip90701 chr4 118765255 118765255 + L1-Ta germline . no 176 .
srip90823 chr4 120717544 120717544 - L1-Ta germline . no 176 .
srip92759 chr4 138177325 138177325 + L1-Ta germline . no 176 .
srip93096 chr4 147225296 147225296 + L1-Ta germline . no 176 SLC10A7
srip95069 chr4 182418058 182418058 - L1-Ta germline . no 176 .
srip95464 chr5 1645773 1645773 + L1-Ta germline . no 176 .
srip96352 chr5 11391276 11391276 + L1-Ta germline . no 176 CTNND2
srip96784 chr5 16883042 16883042 - L1-Ta germline . no 176 MYO10
srip97941 chr5 33633348 33633348 - L1-Ta germline . no 176 ADAMTS12
srip98308 chr5 41428535 41428535 + L1-Ta germline . no 176 PLCXD3
srip98590 chr5 46396964 46396964 + L1-Ta germline . no 176 .
srip99106 chr5 57279517 57279517 + L1-Ta germline . no 176 .
srip100071 chr5 84239673 84239673 - L1-Ta germline . no 176 .
srip100754 chr5 89450781 89450781 + L1-Ta germline . no 176 .
srip101055 chr5 96866407 96866407 + L1-Ta germline . no 176 .
srip102240 chr5 109480258 109480258 - L1-Ta germline . no 176 .
srip102517 chr5 109567542 109567542 + L1-Ta germline . no 176 .
srip102750 chr5 113568828 113568828 - L1-Ta germline . no 176 .
srip104007 chr5 143413889 143413889 + L1-Ta germline . no 176 .
srip104221 chr5 144331013 144331013 - L1-Ta germline . no 176 .
srip105220 chr5 155619865 155619865 + L1-Ta germline . no 176 .
srip105720 chr5 160435665 160435665 - L1-Ta germline . no 176 .
srip105780 chr5 162819864 162819864 + L1-Ta germline . no 176 .
srip107075 chr6 13191033 13191033 + L1-Ta germline . no 176 PHACTR1
srip107535 chr6 13503049 13503049 + L1-Ta germline . no 176 .
srip107612 chr6 16950834 16950834 - L1-Ta germline . no 176 .
srip108082 chr6 32613444 32613444 + L1-Ta germline . no 176 .
srip108262 chr6 45852697 45852697 - L1-Ta germline . no 176 .
srip108659 chr6 46310291 46310291 + L1-Ta germline . no 176 .
srip108950 chr6 56729315 56729315 - L1-Ta germline . no 176 LOC100652827
srip109939 chr6 68112755 68112755 - L1-Ta germline . no 176 .
srip110668 chr6 77379922 77379922 - L1-Ta germline . no 176 .
srip111202 chr6 78649689 78649689 - L1-Ta germline . no 176 .
srip112167 chr6 91669521 91669521 - L1-Ta germline . no 176 .
srip112282 chr6 91767655 91767655 + L1-Ta germline . no 176 .
srip112872 chr6 108786928 108786928 - L1-Ta germline . no 176 LACE1
srip114439 chr6 148163587 148163587 + L1-Ta germline . no 176 .
srip114863 chr6 154215663 154215663 + L1-Ta germline . no 176 .
srip115060 chr6 157968737 157968737 - L1-Ta germline . no 176 ZDHHC14
srip116170 chr7 8886715 8886715 + L1-Ta germline . no 176 .
srip116268 chr7 13620657 13620657 + L1-Ta germline . no 176 .
srip116369 chr7 17094714 17094714 + L1-Ta germline . no 176 .
srip116409 chr7 20170322 20170322 + L1-Ta germline . no 176 .
srip116430 chr7 22416950 22416950 - L1-Ta germline . no 176 .
srip117002 chr7 42529864 42529864 - L1-Ta germline . no 176 .
srip117074 chr7 45485689 45485689 + L1-Ta germline . no 176 .
srip117471 chr7 52789472 52789472 + L1-Ta germline . no 176 .
srip118333 chr7 64086052 64086052 + L1-Ta germline . no 176 .
srip118536 chr7 68194507 68194507 - L1-Ta germline . no 176 .
srip118865 chr7 70188676 70188676 - L1-Ta germline . no 176 AUTS2
srip119841 chr7 84901724 84901724 - L1-Ta germline . no 176 .
srip121773 chr7 107829263 107829263 + L1-Ta germline . no 176 NRCAM
srip121984 chr7 108325661 108325661 + L1-Ta germline . no 176 .
srip122238 chr7 110484749 110484749 + L1-Ta germline . no 176 IMMP2L
srip123122 chr7 134068985 134068985 + L1-Ta germline . no 176 .
srip123759 chr7 156658760 156658760 + L1-Ta germline . no 176 LMBR1
srip125408 chr8 24926545 24926545 - L1-Ta germline . no 176 .
srip126399 chr8 58347940 58347940 + L1-Ta germline . no 176 .
srip126902 chr8 67381885 67381885 - L1-Ta germline . no 176 .
srip127315 chr8 72399221 72399221 - L1-Ta germline . no 176 .
srip127573 chr8 75723722 75723722 + L1-Ta germline . no 176 .
srip128008 chr8 83740679 83740679 + L1-Ta germline . no 176 .
srip128755 chr8 107557032 107557032 - L1-Ta germline . no 176 OXR1
srip128812 chr8 109649041 109649041 + L1-Ta germline . no 176 .
srip128842 chr8 111632621 111632621 + L1-Ta germline . no 176 .
srip129010 chr8 115773126 115773126 + L1-Ta germline . no 176 .
srip129149 chr8 115788580 115788580 - L1-Ta germline . no 176 .
srip130466 chr8 140145235 140145235 - L1-Ta germline . no 176 .
srip130566 chr9 4265400 4265400 + L1-Ta germline . no 176 GLIS3
srip131121 chr9 6290494 6290494 + L1-Ta germline . no 176 .
srip131195 chr9 7426798 7426798 - L1-Ta germline . no 176 .
srip131378 chr9 7741406 7741406 + L1-Ta germline . no 176 .
srip131537 chr9 9236600 9236600 + L1-Ta germline . no 176 PTPRD
srip133659 chr9 35883708 35883708 + L1-Ta germline . no 176 .
srip134014 chr9 74896659 74896659 + L1-Ta germline . no 176 .
srip134359 chr9 91774009 91774009 + L1-Ta germline . no 176 SHC3
srip135197 chr9 105389585 105389585 - L1-Ta germline . no 176 .
srip135269 chr9 106602646 106602646 - L1-Ta germline . no 176 .
srip135974 chr9 118083880 118083880 - L1-Ta germline . no 176 DEC1
srip136031 chr9 121394590 121394590 - L1-Ta germline . no 176 .
srip136525 chrX 14152012 14152012 - L1-Ta germline . no 176 .
srip141107 chrX 123611800 123611800 + L1-Ta germline . no 176 ODZ1
srip141124 chrX 123612276 123612276 - L1-Ta germline . no 176 ODZ1
srip141465 chrX 130495439 130495439 - L1-Ta germline . no 176 .
srip141955 chrX 140515258 140515258 - L1-Ta germline . no 176 .
srip141995 chrX 141955630 141955630 - L1-Ta germline . no 176 .
srip142209 chrY 9951878 9951878 - L1-pre-Ta germline . no 176 .
srip142310 chrY 13653796 13653796 - L1-Ta germline . no 176 .