euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

7 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip11741 chr10 124455216 124455216 + Ta-1 germline validated no 621 .
srip39528 chr15 34031852 34031852 - NC germline validated no 621 RYR3
srip53490 chr2 23191016 23191016 - Ta-1 germline validated no 621 .
srip54255 chr2 36570259 36570259 - Ta-1 germline validated no 621 .
srip98070 chr5 33797557 33797557 - Ta-1 germline validated no 621 ADAMTS12
srip107341 chr6 13503035 13503035 + Ta-1 germline validated no 621 .
srip134530 chr9 94416769 94416769 - NC germline validated no 621 .