euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

209 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1124 chr1 57711299 57711299 - unknown germline . no 576 DAB1
srip1536 chr1 67544680 67544680 + unknown germline . yes 576 .
srip2797 chr1 101978967 101978967 - unknown germline . no 576 .
srip3311 chr1 106396382 106396382 - unknown germline . no 576 .
srip3581 chr1 111526302 111526302 - unknown germline . no 576 .
srip4476 chr1 158238966 158238966 - unknown germline . no 576 .
srip5399 chr1 179575350 179575350 - unknown germline . no 576 TDRD5
srip5774 chr1 189686334 189686334 + unknown germline . no 576 .
srip6742 chr1 220378213 220378213 - unknown germline . no 576 RAB3GAP2
srip7332 chr1 242311549 242311549 + unknown germline . no 576 PLD5
srip8102 chr10 23842031 23842031 - unknown germline . no 576 .
srip8383 chr10 25707676 25707676 - unknown germline . no 576 GPR158
srip9977 chr10 83111793 83111793 - unknown germline . no 576 .
srip10329 chr10 87505368 87505368 - unknown germline . no 576 GRID1
srip10659 chr10 94707784 94707784 - unknown germline . no 576 EXOC6
srip11094 chr10 110453451 110453451 + unknown germline . no 576 .
srip12502 chr11 15380235 15380235 + unknown germline . no 576 .
srip13635 chr11 33670111 33670111 + unknown germline . no 576 C11orf41
srip14526 chr11 42450857 42450857 - unknown germline . no 576 .
srip15288 chr11 58171824 58171824 + unknown germline . no 576 .
srip15819 chr11 60364495 60364495 - unknown germline . no 576 .
srip16143 chr11 72760551 72760551 + unknown germline . no 576 FCHSD2
srip16401 chr11 79917402 79917402 + unknown germline . yes 576 .
srip16457 chr11 80805112 80805112 + unknown germline . no 576 .
srip16735 chr11 83750344 83750344 - unknown germline . no 576 DLG2
srip17053 chr11 94684350 94684350 + unknown germline . no 576 .
srip18256 chr11 114895494 114895494 + unknown germline . no 576 .
srip18945 chr11 134305626 134305626 - unknown germline . no 576 .
srip19605 chr12 8105560 8105560 + unknown germline . no 576 .
srip19750 chr12 11191350 11191350 - unknown germline . no 576 PRH1-PRR4
srip20111 chr12 12933660 12933660 - unknown germline . no 576 APOLD1
srip20377 chr12 24868692 24868692 - unknown germline . no 576 .
srip20696 chr12 28226400 28226400 - unknown germline . no 576 .
srip20967 chr12 33325774 33325774 - unknown germline . no 576 .
srip21542 chr12 34346159 34346159 + unknown germline . no 576 .
srip21877 chr12 40098756 40098756 + unknown germline . no 576 C12orf40
srip22195 chr12 43256961 43256961 - unknown germline . no 576 .
srip22791 chr12 47873142 47873142 + unknown germline . no 576 .
srip23357 chr12 66978550 66978550 + unknown germline . no 576 GRIP1
srip23679 chr12 74781462 74781462 - unknown germline . no 576 .
srip23823 chr12 77861659 77861659 - unknown germline . no 576 .
srip24319 chr12 84955187 84955187 - unknown germline . no 576 .
srip25532 chr12 117814427 117814427 - unknown germline . no 576 .
srip25936 chr12 118186914 118186914 + unknown germline . no 576 KSR2
srip26269 chr12 126802915 126802915 - unknown germline . no 576 .
srip27277 chr13 27488098 27488098 + unknown germline . no 576 .
srip28915 chr13 61462321 61462321 - unknown germline . no 576 .
srip29415 chr13 61734471 61734471 + unknown germline . no 576 .
srip30197 chr13 67084854 67084854 - unknown germline . no 576 PCDH9
srip30312 chr13 72968659 72968659 + unknown germline . no 576 .
srip30427 chr13 74613182 74613182 - unknown germline . no 576 KLF12
srip30941 chr13 79259770 79259770 - unknown germline . no 576 .
srip31402 chr13 85871588 85871588 - unknown germline . no 576 .
srip32352 chr13 91626208 91626208 + unknown germline . no 576 .
srip32723 chr13 96116756 96116756 - unknown germline . no 576 CLDN10
srip32866 chr13 97350602 97350602 - unknown germline . no 576 HS6ST3
srip33469 chr13 104296211 104296211 - unknown germline . no 576 .
srip34038 chr13 106623455 106623455 - unknown germline . no 576 .
srip34557 chr14 26581534 26581534 - unknown germline . no 576 .
srip34840 chr14 28116812 28116812 + unknown germline . no 576 LOC728755
srip35450 chr14 31150794 31150794 - unknown germline . no 576 SCFD1
srip36217 chr14 39875072 39875072 + unknown germline . no 576 FBXO33
srip36931 chr14 46651945 46651945 - unknown germline . no 576 .
srip40118 chr15 47507319 47507319 - unknown germline . no 576 SEMA6D
srip40641 chr15 49878300 49878300 - unknown germline . no 576 C15orf33
srip41166 chr15 56251126 56251126 + unknown germline . no 576 NEDD4
srip42047 chr15 71388519 71388519 - unknown germline . no 576 .
srip42235 chr15 72085476 72085476 + unknown germline . no 576 .
srip42440 chr15 83551609 83551609 - unknown germline . no 576 HOMER2
srip43568 chr16 6793810 6793810 + unknown germline . no 576 RBFOX1
srip44746 chr16 32523869 32523869 + unknown germline . no 576 .
srip45025 chr16 32525600 32525600 - unknown germline . no 576 .
srip45449 chr16 33992419 33992419 + unknown germline . no 576 .
srip46268 chr16 71027998 71027998 + unknown germline . no 576 HYDIN
srip46807 chr17 11764485 11764485 + unknown germline . no 576 DNAH9
srip47008 chr17 22150203 22150203 - unknown germline . no 576 .
srip47189 chr17 28398292 28398292 + unknown germline . no 576 EFCAB5
srip49163 chr18 27219174 27219174 - unknown germline . no 576 .
srip50980 chr18 59579948 59579948 + unknown germline . no 576 .
srip51807 chr18 74960050 74960050 - unknown germline . no 576 .
srip53349 chr2 23190984 23190984 - unknown germline . no 576 .
srip53842 chr2 35879328 35879328 + unknown germline . no 576 .
srip54213 chr2 36570229 36570229 - unknown germline . no 576 .
srip55597 chr2 72413315 72413315 - unknown germline . no 576 EXOC6B
srip56845 chr2 106163144 106163144 + unknown germline . no 576 .
srip57253 chr2 108901173 108901173 - unknown germline . no 576 .
srip58114 chr2 141852873 141852873 - unknown germline . no 576 LRP1B
srip58478 chr2 144010765 144010765 + unknown germline . no 576 ARHGAP15
srip58943 chr2 147020911 147020911 + unknown germline . no 576 .
srip60479 chr2 181000532 181000532 + unknown germline . no 576 .
srip61026 chr2 198499515 198499515 + unknown germline . no 576 RFTN2
srip61197 chr2 201638057 201638057 + unknown germline . no 576 AOX2P
srip61914 chr2 221278206 221278206 - unknown germline . no 576 .
srip62280 chr2 230341537 230341537 + unknown germline . no 576 DNER
srip63179 chr20 9477902 9477902 - unknown germline . no 576 .
srip63901 chr20 21148878 21148878 - unknown germline . no 576 PLK1S1
srip64365 chr20 29638560 29638560 + unknown germline . no 576 .
srip65534 chr21 14390143 14390143 - unknown germline . no 576 .
srip65835 chr21 19517286 19517286 - unknown germline . no 576 .
srip66490 chr21 24060316 24060316 - unknown germline . no 576 .
srip66779 chr21 29069160 29069160 + unknown germline . no 576 .
srip67379 chr22 22486356 22486356 - unknown germline . no 576 IGL@
srip68694 chr22 44324578 44324578 - unknown germline . no 576 PNPLA3
srip70345 chr3 19896236 19896236 - unknown germline . no 576 .
srip70437 chr3 20748878 20748878 - unknown germline . no 576 .
srip71651 chr3 36146939 36146939 - unknown germline . no 576 .
srip72535 chr3 55788556 55788556 + unknown germline . no 576 ERC2
srip73089 chr3 59852877 59852877 + unknown germline . no 576 FHIT
srip74284 chr3 79660944 79660944 + unknown germline . no 576 ROBO1
srip75457 chr3 85576539 85576539 + unknown germline . no 576 CADM2
srip77089 chr3 123590700 123590700 + unknown germline . no 576 MYLK
srip78077 chr3 139634686 139634686 - unknown germline . no 576 .
srip78572 chr3 151148531 151148531 - unknown germline . no 576 MED12L
srip79164 chr3 157620508 157620508 - unknown germline . no 576 .
srip79656 chr3 166764464 166764464 - unknown germline . no 576 .
srip80193 chr3 175677955 175677955 - unknown germline . no 576 .
srip80694 chr3 180877922 180877922 + unknown germline . no 576 .
srip80793 chr3 181192818 181192818 + unknown germline . no 576 .
srip81172 chr3 184677979 184677979 - unknown germline . no 576 VPS8
srip81359 chr3 186372113 186372113 + unknown germline . no 576 .
srip82972 chr4 18162627 18162627 - unknown germline . no 576 .
srip83188 chr4 18194332 18194332 - unknown germline . no 576 .
srip83534 chr4 22909082 22909082 - unknown germline . no 576 .
srip83749 chr4 29321837 29321837 + unknown germline . no 576 .
srip84300 chr4 42984135 42984135 + unknown germline . no 576 GRXCR1
srip85372 chr4 57497040 57497040 - unknown germline . no 576 .
srip85754 chr4 58917503 58917503 - unknown germline . no 576 .
srip86127 chr4 61697133 61697133 - unknown germline . no 576 .
srip86600 chr4 68282406 68282406 - unknown germline . no 576 .
srip86837 chr4 69612552 69612552 - unknown germline . no 576 .
srip87327 chr4 80768521 80768521 + unknown germline . no 576 GDEP
srip87660 chr4 81242092 81242092 - unknown germline . no 576 .
srip88041 chr4 88461091 88461091 - unknown germline . no 576 .
srip88656 chr4 103043669 103043669 - unknown germline . no 576 .
srip88808 chr4 103343731 103343731 + unknown germline . no 576 .
srip89233 chr4 104930177 104930177 + unknown germline . no 576 .
srip90180 chr4 115132680 115132680 + unknown germline . no 576 .
srip92031 chr4 134596403 134596403 + unknown germline . no 576 .
srip92541 chr4 138177310 138177310 + unknown germline . no 576 .
srip92845 chr4 138413516 138413516 - unknown germline . no 576 .
srip93686 chr4 153061908 153061908 - unknown germline . no 576 .
srip93842 chr4 158907262 158907262 - unknown germline . no 576 .
srip94359 chr4 167476673 167476673 - unknown germline . no 576 .
srip94946 chr4 177308485 177308485 - unknown germline . no 576 .
srip95887 chr5 8749504 8749504 + unknown germline . no 576 .
srip96241 chr5 11391249 11391249 + unknown germline . no 576 CTNND2
srip96438 chr5 13231874 13231874 - unknown germline . no 576 .
srip96740 chr5 15913061 15913061 + unknown germline . no 576 FBXL7
srip97168 chr5 26093130 26093130 + unknown germline . no 576 .
srip97600 chr5 33633321 33633321 - unknown germline . no 576 ADAMTS12
srip98522 chr5 44139101 44139101 - unknown germline . no 576 .
srip98806 chr5 51388235 51388235 + unknown germline . no 576 .
srip99041 chr5 52575618 52575618 + unknown germline . no 576 .
srip99320 chr5 67191247 67191247 + unknown germline . no 576 .
srip99481 chr5 68263449 68263449 - unknown germline . no 576 .
srip99674 chr5 71055155 71055155 - unknown germline . no 576 .
srip100061 chr5 84239624 84239624 - unknown germline . no 576 .
srip100426 chr5 89450757 89450757 + unknown germline . no 576 .
srip100987 chr5 96866396 96866396 + unknown germline . no 576 .
srip101403 chr5 99234391 99234391 - unknown germline . no 576 .
srip101615 chr5 105935350 105935350 + unknown germline . no 576 .
srip101938 chr5 108777423 108777423 - unknown germline . no 576 .
srip102210 chr5 109480243 109480243 - unknown germline . no 576 .
srip103286 chr5 125040034 125040034 + unknown germline . no 576 .
srip104122 chr5 144330983 144330983 - unknown germline . no 576 .
srip104559 chr5 147338105 147338105 - unknown germline . yes 576 .
srip104820 chr5 152982343 152982343 - unknown germline . no 576 GRIA1
srip105487 chr5 158929985 158929985 - unknown germline . no 576 .
srip106588 chr5 180329628 180329628 + unknown germline . no 576 BTNL8
srip107020 chr6 13191006 13191006 + unknown germline . no 576 PHACTR1
srip109347 chr6 62482852 62482852 + unknown germline . no 576 KHDRBS2
srip109786 chr6 65105560 65105560 - unknown germline . no 576 EYS
srip110878 chr6 77980628 77980628 - unknown germline . no 576 .
srip111651 chr6 89122014 89122014 - unknown germline . no 576 .
srip111797 chr6 90839145 90839145 - unknown germline . no 576 BACH2
srip111990 chr6 91669497 91669497 - unknown germline . no 576 .
srip112618 chr6 102283722 102283722 - unknown germline . no 576 GRIK2
srip113318 chr6 123853924 123853924 - unknown germline . no 576 TRDN
srip113755 chr6 142450086 142450086 - unknown germline . no 576 .
srip114103 chr6 145500885 145500885 - unknown germline . no 576 .
srip114262 chr6 146301931 146301931 - unknown germline . no 576 .
srip115418 chr6 162181244 162181244 + unknown germline . no 576 PARK2
srip116998 chr7 42529852 42529852 - unknown germline . no 576 .
srip118798 chr7 70188666 70188666 - unknown germline . no 576 AUTS2
srip119411 chr7 82030907 82030907 - unknown germline . no 576 CACNA2D1
srip119640 chr7 84901705 84901705 - unknown germline . no 576 .
srip121419 chr7 107829239 107829239 + unknown germline . no 576 NRCAM
srip121916 chr7 108325645 108325645 + unknown germline . no 576 .
srip122942 chr7 127603391 127603391 + unknown germline . no 576 SND1
srip124025 chr8 4345013 4345013 - unknown germline . no 576 CSMD1
srip124321 chr8 5829265 5829265 - unknown germline . no 576 .
srip124748 chr8 8334290 8334290 - unknown germline . yes 576 .
srip124949 chr8 18455788 18455788 + unknown germline . yes 576 PSD3
srip125201 chr8 24421536 24421536 - unknown germline . no 576 .
srip125990 chr8 51013839 51013839 + unknown germline . no 576 SNTG1
srip126598 chr8 64686904 64686904 - unknown germline . no 576 LOC286184
srip128389 chr8 90170793 90170793 + unknown germline . no 576 .
srip129122 chr8 115788554 115788554 - unknown germline . no 576 .
srip130668 chr9 5491391 5491391 + unknown germline . no 576 .
srip132064 chr9 29114733 29114733 - unknown germline . no 576 .
srip132268 chr9 29998832 29998832 - unknown germline . no 576 .
srip133177 chr9 32463872 32463872 - unknown germline . no 576 DDX58
srip135532 chr9 111564944 111564944 + unknown germline . no 576 .
srip135859 chr9 118083818 118083818 - unknown germline . no 576 DEC1
srip137962 chrX 62816726 62816726 + unknown germline . no 576 .
srip139003 chrX 75949527 75949527 - unknown germline . no 576 .
srip139416 chrX 85781770 85781770 + unknown germline . no 576 DACH2
srip140035 chrX 102363162 102363162 + unknown germline . no 576 .
srip141033 chrX 120962306 120962306 - unknown germline . no 576 .