euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

312 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip586 chr1 44618908 44618908 - unknown germline . no 506 .
srip1076 chr1 57711299 57711299 - unknown germline . no 506 DAB1
srip1467 chr1 67544680 67544680 + unknown germline . yes 506 .
srip3548 chr1 111526302 111526302 - unknown germline . no 506 .
srip4436 chr1 158238966 158238966 - unknown germline . no 506 .
srip4606 chr1 164239531 164239531 + unknown germline . no 506 .
srip5366 chr1 179575350 179575350 - unknown germline . no 506 TDRD5
srip5754 chr1 189686334 189686334 + unknown germline . no 506 .
srip6695 chr1 220378213 220378213 - unknown germline . no 506 RAB3GAP2
srip6817 chr1 221827794 221827794 - unknown germline . no 506 .
srip7158 chr1 231079125 231079125 + unknown germline . no 506 TTC13
srip7317 chr1 242311549 242311549 + unknown germline . no 506 PLD5
srip7905 chr10 19216642 19216642 + unknown germline . no 506 .
srip8189 chr10 25576907 25576907 - unknown germline . no 506 GPR158
srip8342 chr10 25707676 25707676 - unknown germline . no 506 GPR158
srip9227 chr10 66831656 66831656 - unknown germline . no 506 .
srip9366 chr10 67260458 67260458 + unknown germline . no 506 .
srip9563 chr10 68949307 68949307 + unknown germline . no 506 CTNNA3
srip9763 chr10 78577575 78577575 - unknown germline . no 506 .
srip10435 chr10 90706777 90706777 - unknown germline . no 506 ACTA2
srip11050 chr10 110453451 110453451 + unknown germline . no 506 .
srip11597 chr10 123180643 123180643 - unknown germline . no 506 .
srip11891 chr10 126983613 126983613 - unknown germline . no 506 .
srip12175 chr11 1112673 1112673 - unknown germline . no 506 .
srip12341 chr11 13507429 13507429 - unknown germline . no 506 .
srip13171 chr11 28287509 28287509 + unknown germline . no 506 METTL15
srip13913 chr11 37811154 37811154 + unknown germline . no 506 .
srip14500 chr11 42450857 42450857 - unknown germline . no 506 .
srip14707 chr11 48360720 48360720 - unknown germline . no 506 .
srip14949 chr11 50399954 50399954 - unknown germline . no 506 .
srip15262 chr11 58171824 58171824 + unknown germline . no 506 .
srip15758 chr11 60364495 60364495 - unknown germline . no 506 .
srip16092 chr11 72760551 72760551 + unknown germline . no 506 FCHSD2
srip16358 chr11 79917402 79917402 + unknown germline . yes 506 .
srip16696 chr11 83750344 83750344 - unknown germline . no 506 DLG2
srip17620 chr11 104556111 104556111 - unknown germline . no 506 .
srip18881 chr11 134305626 134305626 - unknown germline . no 506 .
srip19507 chr12 5225709 5225709 + unknown germline . no 506 .
srip20414 chr12 25208660 25208660 + unknown germline . no 506 LRMP
srip20651 chr12 28226400 28226400 - unknown germline . no 506 .
srip21294 chr12 34276519 34276519 - unknown germline . no 506 .
srip21687 chr12 34661714 34661714 + unknown germline . no 506 .
srip21852 chr12 40098756 40098756 + unknown germline . no 506 C12orf40
srip22734 chr12 47873142 47873142 + unknown germline . no 506 .
srip23103 chr12 63837601 63837601 - unknown germline . no 506 .
srip23309 chr12 66978550 66978550 + unknown germline . no 506 GRIP1
srip23645 chr12 74781462 74781462 - unknown germline . no 506 .
srip23793 chr12 77861659 77861659 - unknown germline . no 506 .
srip23907 chr12 79338008 79338008 - unknown germline . no 506 SYT1
srip24129 chr12 79826190 79826190 - unknown germline . no 506 SYT1
srip24295 chr12 84955187 84955187 - unknown germline . no 506 .
srip25078 chr12 93603867 93603867 - unknown germline . no 506 LOC643339
srip25783 chr12 118057334 118057334 - unknown germline . no 506 KSR2
srip26238 chr12 126802915 126802915 - unknown germline . no 506 .
srip26609 chr12 127579218 127579218 + unknown germline . no 506 .
srip26697 chr13 19620965 19620965 + unknown germline . no 506 PHF2P1
srip26831 chr13 22489779 22489779 + unknown germline . no 506 .
srip27782 chr13 37724174 37724174 + unknown germline . no 506 .
srip28075 chr13 47031518 47031518 + unknown germline . no 506 .
srip28140 chr13 48266680 48266680 + unknown germline . no 506 .
srip28222 chr13 49521699 49521699 + unknown germline . no 506 .
srip28869 chr13 61462321 61462321 - unknown germline . no 506 .
srip29376 chr13 61734471 61734471 + unknown germline . no 506 .
srip30140 chr13 67084854 67084854 - unknown germline . no 506 PCDH9
srip30873 chr13 79259770 79259770 - unknown germline . no 506 .
srip31361 chr13 85871588 85871588 - unknown germline . no 506 .
srip32163 chr13 88108003 88108003 - unknown germline . no 506 MIR4500HG
srip32674 chr13 96116756 96116756 - unknown germline . no 506 CLDN10
srip32842 chr13 97350602 97350602 - unknown germline . no 506 HS6ST3
srip33146 chr13 101391109 101391109 + unknown germline . no 506 .
srip33405 chr13 104296211 104296211 - unknown germline . no 506 .
srip33989 chr13 106623455 106623455 - unknown germline . no 506 .
srip34191 chr13 107857461 107857461 - unknown germline . no 506 FAM155A
srip34541 chr14 26581534 26581534 - unknown germline . no 506 .
srip34789 chr14 28116812 28116812 + unknown germline . no 506 LOC728755
srip35013 chr14 28301203 28301203 + unknown germline . no 506 .
srip36475 chr14 42122864 42122864 + unknown germline . no 506 LRFN5
srip36563 chr14 42274786 42274786 - unknown germline . no 506 LRFN5
srip36899 chr14 46651945 46651945 - unknown germline . no 506 .
srip37534 chr14 60617378 60617378 - unknown germline . no 506 DHRS7
srip37809 chr14 67419854 67419854 - unknown germline . no 506 GPHN
srip37923 chr14 68784217 68784217 + unknown germline . no 506 RAD51B
srip38347 chr14 79319635 79319635 - unknown germline . no 506 NRXN3
srip40519 chr15 49652329 49652329 + unknown germline . no 506 C15orf33
srip40907 chr15 53956090 53956090 + unknown germline . no 506 WDR72
srip41134 chr15 56251126 56251126 + unknown germline . no 506 NEDD4
srip41466 chr15 59794476 59794476 - unknown germline . no 506 FAM81A
srip41993 chr15 71388519 71388519 - unknown germline . no 506 .
srip42195 chr15 72085476 72085476 + unknown germline . no 506 .
srip42760 chr15 98046018 98046018 + unknown germline . no 506 .
srip42903 chr15 98051276 98051276 + unknown germline . no 506 .
srip43199 chr15 100931133 100931133 - unknown germline . no 506 .
srip43779 chr16 6987037 6987037 + unknown germline . no 506 RBFOX1
srip43981 chr16 8542726 8542726 - unknown germline . no 506 .
srip44351 chr16 20365406 20365406 - unknown germline . no 506 .
srip44435 chr16 22802319 22802319 + unknown germline . no 506 .
srip44978 chr16 32525600 32525600 - unknown germline . no 506 .
srip45287 chr16 33976979 33976979 - unknown germline . no 506 .
srip45421 chr16 33992419 33992419 + unknown germline . no 506 .
srip45673 chr16 53436718 53436718 - unknown germline . no 506 .
srip46203 chr16 71027998 71027998 + unknown germline . no 506 HYDIN
srip46755 chr17 11764485 11764485 + unknown germline . no 506 DNAH9
srip46839 chr17 18776439 18776439 - unknown germline . no 506 PRPSAP2
srip46968 chr17 22150203 22150203 - unknown germline . no 506 .
srip47838 chr17 34272141 34272141 + unknown germline . no 506 .
srip48067 chr17 61404763 61404763 + unknown germline . no 506 TANC2
srip48647 chr18 843698 843698 - unknown germline . no 506 .
srip48863 chr18 12491255 12491255 + unknown germline . no 506 SPIRE1
srip49967 chr18 49216206 49216206 - unknown germline . no 506 .
srip50562 chr18 51762718 51762718 - unknown germline . no 506 .
srip52012 chr19 15152136 15152136 - unknown germline . no 506 .
srip52148 chr19 23825804 23825804 - unknown germline . no 506 .
srip52287 chr19 27793326 27793326 - unknown germline . no 506 .
srip52630 chr2 3783028 3783028 - unknown germline . no 506 DCDC2C
srip53036 chr2 13631539 13631539 - unknown germline . no 506 .
srip53131 chr2 22706317 22706317 + unknown germline . no 506 .
srip54852 chr2 51655388 51655388 + unknown germline . no 506 .
srip55148 chr2 66366199 66366199 + unknown germline . no 506 .
srip55538 chr2 72413315 72413315 - unknown germline . no 506 EXOC6B
srip55787 chr2 79929362 79929362 + unknown germline . no 506 CTNNA2
srip55898 chr2 80826972 80826972 - unknown germline . no 506 CTNNA2
srip56396 chr2 83188313 83188313 + unknown germline . no 506 .
srip57202 chr2 108901173 108901173 - unknown germline . no 506 .
srip57562 chr2 126008639 126008639 + unknown germline . no 506 .
srip58884 chr2 147020911 147020911 + unknown germline . no 506 .
srip59396 chr2 152887261 152887261 - unknown germline . no 506 CACNB4
srip60022 chr2 178676240 178676240 - unknown germline . no 506 PDE11A
srip60330 chr2 179357273 179357273 + unknown germline . no 506 PLEKHA3
srip61516 chr2 209682250 209682250 - unknown germline . no 506 .
srip62828 chr20 6120498 6120498 - unknown germline . no 506 .
srip62958 chr20 6173654 6173654 + unknown germline . no 506 .
srip63165 chr20 9477902 9477902 - unknown germline . no 506 .
srip63601 chr20 17860913 17860913 + unknown germline . no 506 .
srip63850 chr20 21148878 21148878 - unknown germline . no 506 PLK1S1
srip64321 chr20 29638560 29638560 + unknown germline . no 506 .
srip65076 chr20 44157049 44157049 - unknown germline . no 506 .
srip65383 chr21 10749944 10749944 + unknown germline . no 506 .
srip65792 chr21 19517286 19517286 - unknown germline . no 506 .
srip66442 chr21 24060316 24060316 - unknown germline . no 506 .
srip66744 chr21 29069160 29069160 + unknown germline . no 506 .
srip68133 chr22 29007687 29007687 - unknown germline . yes 506 TTC28
srip68444 chr22 41019372 41019372 - unknown germline . no 506 MKL1
srip68558 chr22 42244162 42244162 - unknown germline . no 506 SREBF2
srip69799 chr3 3408031 3408031 + unknown germline . no 506 .
srip69975 chr3 5189072 5189072 - unknown germline . no 506 ARL8B
srip70291 chr3 19896236 19896236 - unknown germline . no 506 .
srip71261 chr3 27239558 27239558 - unknown germline . no 506 .
srip71313 chr3 30419354 30419354 - unknown germline . no 506 .
srip71596 chr3 36146939 36146939 - unknown germline . no 506 .
srip72318 chr3 55010457 55010457 + unknown germline . no 506 CACNA2D3
srip73029 chr3 59852877 59852877 + unknown germline . no 506 FHIT
srip73482 chr3 63247892 63247892 - unknown germline . no 506 .
srip74231 chr3 79660944 79660944 + unknown germline . no 506 ROBO1
srip74527 chr3 80798200 80798200 + unknown germline . no 506 .
srip75234 chr3 84593258 84593258 - unknown germline . no 506 .
srip75428 chr3 85576539 85576539 + unknown germline . no 506 CADM2
srip75742 chr3 86255393 86255393 - unknown germline . no 506 .
srip75776 chr3 86264918 86264918 - unknown germline . no 506 .
srip76077 chr3 98775471 98775471 - unknown germline . no 506 .
srip76328 chr3 101936459 101936459 + unknown germline . no 506 .
srip77055 chr3 123590700 123590700 + unknown germline . no 506 MYLK
srip77728 chr3 134411227 134411227 - unknown germline . no 506 .
srip78041 chr3 139634686 139634686 - unknown germline . no 506 .
srip78518 chr3 151148531 151148531 - unknown germline . no 506 MED12L
srip79123 chr3 157620508 157620508 - unknown germline . no 506 .
srip79427 chr3 165320854 165320854 - unknown germline . no 506 .
srip79616 chr3 166764464 166764464 - unknown germline . no 506 .
srip80009 chr3 173917195 173917195 - unknown germline . no 506 NLGN1
srip80642 chr3 180877922 180877922 + unknown germline . no 506 .
srip81118 chr3 184677979 184677979 - unknown germline . no 506 VPS8
srip81319 chr3 186372113 186372113 + unknown germline . no 506 .
srip81826 chr3 192080499 192080499 + unknown germline . no 506 FGF12
srip81981 chr3 193354152 193354152 - unknown germline . no 506 OPA1
srip82923 chr4 18162627 18162627 - unknown germline . no 506 .
srip83170 chr4 18194332 18194332 - unknown germline . no 506 .
srip83505 chr4 22909082 22909082 - unknown germline . no 506 .
srip84009 chr4 37952095 37952095 - unknown germline . no 506 TBC1D1
srip84241 chr4 42984135 42984135 + unknown germline . no 506 GRXCR1
srip84462 chr4 45890702 45890702 - unknown germline . no 506 .
srip85151 chr4 53902427 53902427 - unknown germline . no 506 SCFD2
srip85247 chr4 56713958 56713958 - unknown germline . no 506 .
srip85729 chr4 58917503 58917503 - unknown germline . no 506 .
srip86094 chr4 61697133 61697133 - unknown germline . no 506 .
srip86555 chr4 68282406 68282406 - unknown germline . no 506 .
srip86798 chr4 69612552 69612552 - unknown germline . no 506 .
srip87623 chr4 81242092 81242092 - unknown germline . no 506 .
srip88020 chr4 88461091 88461091 - unknown germline . no 506 .
srip88276 chr4 98560434 98560434 - unknown germline . no 506 C4orf37
srip88596 chr4 103043669 103043669 - unknown germline . no 506 .
srip88774 chr4 103343731 103343731 + unknown germline . no 506 .
srip89557 chr4 110248303 110248303 - unknown germline . no 506 .
srip90139 chr4 115132680 115132680 + unknown germline . no 506 .
srip90384 chr4 116660137 116660137 - unknown germline . no 506 .
srip90535 chr4 117153199 117153199 - unknown germline . no 506 .
srip90602 chr4 118332385 118332385 - unknown germline . no 506 .
srip90779 chr4 120717502 120717502 - unknown germline . no 506 .
srip91037 chr4 125208813 125208813 + unknown germline . no 506 .
srip91255 chr4 130361631 130361631 - unknown germline . no 506 .
srip91471 chr4 131551685 131551685 + unknown germline . no 506 .
srip91811 chr4 132357338 132357338 + unknown germline . no 506 .
srip93622 chr4 153061908 153061908 - unknown germline . no 506 .
srip94317 chr4 167476673 167476673 - unknown germline . no 506 .
srip94882 chr4 177308485 177308485 - unknown germline . no 506 .
srip94956 chr4 178471491 178471491 - unknown germline . no 506 .
srip95036 chr4 181481032 181481032 - unknown germline . no 506 .
srip95648 chr5 4621424 4621424 - unknown germline . no 506 .
srip96676 chr5 15913061 15913061 + unknown germline . no 506 FBXL7
srip97290 chr5 29575784 29575784 + unknown germline . no 506 .
srip98499 chr5 44139101 44139101 - unknown germline . no 506 .
srip98566 chr5 45704503 45704503 - unknown germline . no 506 .
srip98776 chr5 51388235 51388235 + unknown germline . no 506 .
srip99002 chr5 52575618 52575618 + unknown germline . no 506 .
srip100019 chr5 84239624 84239624 - unknown germline . no 506 .
srip100365 chr5 89450757 89450757 + unknown germline . no 506 .
srip100959 chr5 96866396 96866396 + unknown germline . no 506 .
srip101197 chr5 96952628 96952628 - unknown germline . no 506 .
srip101368 chr5 99234391 99234391 - unknown germline . no 506 .
srip101887 chr5 108777423 108777423 - unknown germline . no 506 .
srip102156 chr5 109480243 109480243 - unknown germline . no 506 .
srip102457 chr5 109567514 109567514 + unknown germline . no 506 .
srip103162 chr5 125012524 125012524 - unknown germline . no 506 .
srip103270 chr5 125040034 125040034 + unknown germline . no 506 .
srip104521 chr5 147338105 147338105 - unknown germline . yes 506 .
srip104769 chr5 152982343 152982343 - unknown germline . no 506 GRIA1
srip105456 chr5 158929985 158929985 - unknown germline . no 506 .
srip105653 chr5 160435636 160435636 - unknown germline . no 506 .
srip105973 chr5 171310661 171310661 - unknown germline . no 506 FBXW11
srip106017 chr5 172722551 172722551 + unknown germline . no 506 .
srip106291 chr5 177401287 177401287 + unknown germline . no 506 .
srip106536 chr5 180329628 180329628 + unknown germline . no 506 BTNL8
srip106756 chr6 10708958 10708958 - unknown germline . no 506 PAK1IP1
srip106870 chr6 12237456 12237456 - unknown germline . no 506 .
srip107287 chr6 13503024 13503024 + unknown germline . no 506 .
srip107833 chr6 27996740 27996740 - unknown germline . no 506 .
srip109051 chr6 57494205 57494205 - unknown germline . no 506 PRIM2
srip109805 chr6 65476996 65476996 - unknown germline . no 506 EYS
srip110260 chr6 73089780 73089780 + unknown germline . no 506 RIMS1
srip110625 chr6 77379908 77379908 - unknown germline . no 506 .
srip110835 chr6 77980628 77980628 - unknown germline . no 506 .
srip111613 chr6 89122014 89122014 - unknown germline . no 506 .
srip111762 chr6 90839145 90839145 - unknown germline . no 506 BACH2
srip111949 chr6 91669497 91669497 - unknown germline . no 506 .
srip112246 chr6 91767629 91767629 + unknown germline . no 506 .
srip112569 chr6 102283722 102283722 - unknown germline . no 506 GRIK2
srip115365 chr6 162181244 162181244 + unknown germline . no 506 PARK2
srip115820 chr6 162731404 162731404 + unknown germline . no 506 PARK2
srip115964 chr6 163113050 163113050 - unknown germline . no 506 PARK2
srip116589 chr7 26794895 26794895 + unknown germline . no 506 SKAP2
srip117826 chr7 57728143 57728143 - unknown germline . no 506 LOC100287663
srip118763 chr7 70188666 70188666 - unknown germline . no 506 AUTS2
srip119126 chr7 76919295 76919295 + unknown germline . no 506 CCDC146
srip119359 chr7 82030907 82030907 - unknown germline . no 506 CACNA2D1
srip119596 chr7 84901705 84901705 - unknown germline . no 506 .
srip120335 chr7 85291647 85291647 - unknown germline . no 506 .
srip120378 chr7 86719193 86719193 - unknown germline . no 506 .
srip120654 chr7 92680706 92680706 - unknown germline . no 506 .
srip120884 chr7 94766720 94766720 + unknown germline . no 506 PPP1R9A
srip121066 chr7 105459573 105459573 - unknown germline . no 506 ATXN7L1
srip121120 chr7 105967850 105967850 + unknown germline . no 506 .
srip121366 chr7 107829239 107829239 + unknown germline . no 506 NRCAM
srip122396 chr7 112789596 112789596 - unknown germline . no 506 .
srip122624 chr7 122124530 122124530 + unknown germline . no 506 CADPS2
srip122884 chr7 127603391 127603391 + unknown germline . no 506 SND1
srip123633 chr7 146513183 146513183 - unknown germline . no 506 CNTNAP2
srip123971 chr8 4345013 4345013 - unknown germline . no 506 CSMD1
srip124270 chr8 5829265 5829265 - unknown germline . no 506 .
srip124706 chr8 8334290 8334290 - unknown germline . yes 506 .
srip124941 chr8 18455788 18455788 + unknown germline . yes 506 PSD3
srip125097 chr8 23645882 23645882 + unknown germline . no 506 .
srip125185 chr8 24421536 24421536 - unknown germline . no 506 .
srip125254 chr8 24707022 24707022 - unknown germline . no 506 .
srip125374 chr8 24926529 24926529 - unknown germline . no 506 .
srip125580 chr8 25323077 25323077 - unknown germline . no 506 CDCA2
srip125962 chr8 51013839 51013839 + unknown germline . no 506 SNTG1
srip126279 chr8 56620569 56620569 - unknown germline . no 506 .
srip126375 chr8 58347927 58347927 + unknown germline . no 506 .
srip127166 chr8 72399210 72399210 - unknown germline . no 506 .
srip127834 chr8 83640785 83640785 + unknown germline . no 506 .
srip128611 chr8 99524288 99524288 - unknown germline . no 506 STK3
srip129099 chr8 115788554 115788554 - unknown germline . no 506 .
srip129307 chr8 115881756 115881756 + unknown germline . no 506 .
srip129768 chr8 123111073 123111073 + unknown germline . no 506 .
srip130259 chr8 132865833 132865833 + unknown germline . no 506 .
srip131823 chr9 20063550 20063550 - unknown germline . no 506 .
srip132036 chr9 29114733 29114733 - unknown germline . no 506 .
srip132227 chr9 29998832 29998832 - unknown germline . no 506 .
srip132337 chr9 30495867 30495867 - unknown germline . no 506 .
srip132728 chr9 31748212 31748212 + unknown germline . no 506 .
srip132828 chr9 32092721 32092721 - unknown germline . no 506 .
srip133132 chr9 32463872 32463872 - unknown germline . no 506 DDX58
srip133746 chr9 66314291 66314291 - unknown germline . no 506 .
srip135182 chr9 105219849 105219849 + unknown germline . no 506 .
srip135251 chr9 106602620 106602620 - unknown germline . no 506 .
srip135369 chr9 108539394 108539394 - unknown germline . no 506 .
srip135451 chr9 109594195 109594195 - unknown germline . no 506 .
srip135819 chr9 118083818 118083818 - unknown germline . no 506 DEC1
srip136262 chrX 4659582 4659582 - unknown germline . no 506 .
srip136458 chrX 14151990 14151990 - unknown germline . no 506 .
srip136918 chrX 34942070 34942070 - unknown germline . no 506 .
srip137188 chrX 54790788 54790788 + unknown germline . no 506 ITIH5L
srip137753 chrX 58482468 58482468 - unknown germline . no 506 .
srip137930 chrX 62816726 62816726 + unknown germline . no 506 .
srip138072 chrX 63470223 63470223 - unknown germline . no 506 .
srip138231 chrX 63516573 63516573 + unknown germline . no 506 MTMR8
srip138574 chrX 74008873 74008873 - unknown germline . no 506 KIAA2022
srip138687 chrX 74988473 74988473 + unknown germline . no 506 .
srip138951 chrX 75949527 75949527 - unknown germline . no 506 .
srip139256 chrX 83000964 83000964 - unknown germline . no 506 .
srip140993 chrX 120962306 120962306 - unknown germline . no 506 .
srip141745 chrX 138246341 138246341 + unknown germline . no 506 FGF13
srip141912 chrX 140515246 140515246 - unknown germline . no 506 .
srip142250 chrY 9954654 9954654 + unknown germline . no 506 .