euL1db
The European database of L1-HS retrotransposon insertions in humans
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id
srip_id
study_id
integrity
chromosome
genomic_start
genomic_stop
genomic_strand
reference_start
reference_stop
pcr_results
class
family
sub_family
sub_group
tsd_del_size
tsd_del_sequence
inversion_detected
inversion_start
inversion_stop
polya_size
lineage
method_id
pcr_5_junction
pcr_3_junction
forward_primer
reverse_primer
allele_frequency
transduction_5p_detected
transduction_5p_coordinates
transduction_5p_source
transduction_3p_detected
transduction_3p_coordinates
transduction_3p_source
l1_activity
sample_id
gene_name
reference_l1hs
mrip_id
sequence
comments
ID
Chromosome
Start
Stop
Strand
SubFamily
Lineage
PCR
SamplesID
Reference
GeneName
srip7
chr1
3130361
3130361
-
unknown
germline
.
155
no
PRDM16
srip250
chr1
32411270
32411270
+
unknown
germline
.
52
no
.
srip324
chr1
39727987
39727987
-
unknown
germline
.
47
no
MACF1
srip349
chr1
41502709
41502709
+
unknown
germline
.
142
no
LOC100507178;SCMH1
srip350
chr1
41502709
41502709
+
unknown
germline
.
147
no
LOC100507178;SCMH1
srip351
chr1
41502709
41502709
+
unknown
germline
.
65
no
LOC100507178;SCMH1
srip593
chr1
44704783
44704783
+
unknown
germline
.
13
no
ERI3
srip601
chr1
46069049
46069049
-
unknown
germline
.
54
no
NASP
srip613
chr1
49428729
49428729
-
unknown
germline
validated
101
no
AGBL4
srip614
chr1
49428729
49428729
-
unknown
germline
validated
121
no
AGBL4
srip615
chr1
49428729
49428729
-
unknown
germline
validated
85
no
AGBL4
srip616
chr1
49428729
49428729
-
unknown
germline
validated
88
no
AGBL4
srip617
chr1
49428729
49428729
-
unknown
germline
validated
91
no
AGBL4
srip618
chr1
49428729
49428729
-
unknown
germline
validated
1
no
AGBL4
srip619
chr1
49428729
49428729
-
unknown
germline
validated
15
no
AGBL4
srip620
chr1
49428729
49428729
-
unknown
germline
validated
31
no
AGBL4
srip621
chr1
49428729
49428729
-
unknown
germline
validated
44
no
AGBL4
srip622
chr1
49428729
49428729
-
unknown
germline
validated
54
no
AGBL4
srip623
chr1
49428729
49428729
-
unknown
germline
validated
55
no
AGBL4
srip624
chr1
49428729
49428729
-
unknown
germline
validated
106
no
AGBL4
srip625
chr1
49428729
49428729
-
unknown
germline
validated
107
no
AGBL4
srip626
chr1
49428729
49428729
-
unknown
germline
validated
108
no
AGBL4
srip627
chr1
49428729
49428729
-
unknown
germline
validated
109
no
AGBL4
srip628
chr1
49428729
49428729
-
unknown
germline
validated
111
no
AGBL4
srip629
chr1
49428729
49428729
-
unknown
germline
validated
112
no
AGBL4
srip630
chr1
49428729
49428729
-
unknown
germline
validated
113
no
AGBL4
srip631
chr1
49428729
49428729
-
unknown
germline
validated
137
no
AGBL4
srip632
chr1
49428729
49428729
-
unknown
germline
validated
138
no
AGBL4
srip633
chr1
49428729
49428729
-
unknown
germline
validated
139
no
AGBL4
srip634
chr1
49428729
49428729
-
unknown
germline
validated
140
no
AGBL4
srip635
chr1
49428729
49428729
-
unknown
germline
validated
142
no
AGBL4
srip636
chr1
49428729
49428729
-
unknown
germline
validated
145
no
AGBL4
srip637
chr1
49428729
49428729
-
unknown
germline
validated
148
no
AGBL4
srip638
chr1
49428729
49428729
-
unknown
germline
validated
150
no
AGBL4
srip639
chr1
49428729
49428729
-
unknown
germline
validated
152
no
AGBL4
srip640
chr1
49428729
49428729
-
unknown
germline
validated
154
no
AGBL4
srip641
chr1
49428729
49428729
-
unknown
germline
validated
57
no
AGBL4
srip642
chr1
49428729
49428729
-
unknown
germline
validated
58
no
AGBL4
srip643
chr1
49428729
49428729
-
unknown
germline
validated
60
no
AGBL4
srip644
chr1
49428729
49428729
-
unknown
germline
validated
61
no
AGBL4
1
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3
4
5
6
7
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9
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11
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13
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Rows 1 - 40 (Total Result = 8768 records)